| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4634 |
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| Symbol | |
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| ID | 6113615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5120007 |
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| End bp | 5121494 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624440 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001751483 |
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| Protein GI | 170723795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.23273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.199142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAA TCCTCCTTAC CCTGCTGCTC CTGCTGCCCC TGGCAACCCA GGCCAGCGAG
GGCGAATTCT TCCTCACCGC CAAGCCCGCC GAGCAGGCTC GCCTGCTCGA AGGCTGGGCG
GCGCAACCCG AAGCCGCGCG CCTGCCGCTG CTGGAAAACC TGCGCCAGGG CCGCATCGCA
GCCGATGACA CCCGCAAGGT GCGCCTTAAC AACCGCCTGC GCGGCCTGAT CGATAACGCC
CTGGCCAGCC ACCAGTTGCT CAGCGACAAC AGCGACACTC GCTTGGCCGC CGCCCAGCAA
CTGCAAAAAA GTGCGCAACC GGCGCAAATG GCATTCCTCG ACCGGCGCTT TGCCAGCGAA
CCCGACACTA CCGTGCACGC CGCGCTTGGC CTGGCACTGG CCAACCTGCA ACTGGGCGCC
AGCGAGCCAG CCGTACGCCT GGCGGCGGTA CGCCTGCTCG GCGAAACCGG CGACCCGCTG
GCCCGCACCC GCCTGGAGAC CTTGCTGCAA CCCGACGTGG AAACCGACGC AGGCGTGCGC
ACTGCAGCTG AAACAAGCCT GGCCCAGGTC AAACGCAAGC TGCTGTTCGG TGAGCTGCTC
GGCCAGGCTT TCAGCGGCCT GTCGCTGGGT TCGATCCTGC TGCTGGCGGC CCTTGGCCTG
GCGATCACCT TCGGGCTGCT GGGCGTGATC AACATGGCCC ACGGCGAGAT GCTCATGCTC
GGTGCTTACA GCACCTACAT GGTCCAGGTG CTGCTGCAGC GCTACGCGCC AGGCGCAATC
GAGTTCTACC CGCTGATTGC CCTGCCAGTG GCCTTCGCCG TCAGCGCCGG CGTGGGCATG
GCCCTGGAGC GCACGGTGAT CCGCCACCTC TACGGCCGCC CGCTGGAAAC CCTGCTGGCG
ACCTGGGGCA TCAGCCTGAT GCTGATCCAG GCCATCCGCC TGCTGTTCGG CGCGCAGAAC
GTCGAGGTCA GCAACCCGGC CTGGCTGTCT GGTGGCATCC AGCTGCTACC CAACCTGGTG
CTGCCCTACA ACCGCCTGGT GATCATTGCC TTCGCCTTGG CGGTGGTACT GCTGACCTGG
CTGCTGCTCA ACCGCACGCG GCTGGGCCTG AACGTACGTG CGGTCACCCA GAATCGCAAC
ATGGCTGCCT GCTGTGGCGT GTCCACCGGG CGCGTGGACA TGCTCGCCTT CGGCCTGGGC
TCGGGCATTG CCGGGCTTGG TGGTGTAGCG CTGAGCCAGG TCGGCAACGT CGGCCCGGAC
CTTGGCCAGA GCTACATCAT CGACTCTTTC CTGGTGGTGG TGCTCGGCGG TGTCGGGCAA
CTGGCCGGTA GCCTCTGGGC CGCCTTCGGC CTAGGGATAG CCAACAAGCT GCTAGAACCG
CAAATCGGCG CGGTGCTTGG CAAGATCCTC ATCCTTGCGT TGATCATTCT GTTCATCCAG
AAGCGCCCGC AAGGCCTGTT CGCCCTCAAG GGACGGGTTA TCGACTGA
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| Protein sequence | MLRILLTLLL LLPLATQASE GEFFLTAKPA EQARLLEGWA AQPEAARLPL LENLRQGRIA
ADDTRKVRLN NRLRGLIDNA LASHQLLSDN SDTRLAAAQQ LQKSAQPAQM AFLDRRFASE
PDTTVHAALG LALANLQLGA SEPAVRLAAV RLLGETGDPL ARTRLETLLQ PDVETDAGVR
TAAETSLAQV KRKLLFGELL GQAFSGLSLG SILLLAALGL AITFGLLGVI NMAHGEMLML
GAYSTYMVQV LLQRYAPGAI EFYPLIALPV AFAVSAGVGM ALERTVIRHL YGRPLETLLA
TWGISLMLIQ AIRLLFGAQN VEVSNPAWLS GGIQLLPNLV LPYNRLVIIA FALAVVLLTW
LLLNRTRLGL NVRAVTQNRN MAACCGVSTG RVDMLAFGLG SGIAGLGGVA LSQVGNVGPD
LGQSYIIDSF LVVVLGGVGQ LAGSLWAAFG LGIANKLLEP QIGAVLGKIL ILALIILFIQ
KRPQGLFALK GRVID
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