| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4633 |
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| Symbol | |
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| ID | 6113614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5118614 |
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| End bp | 5119879 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624439 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001751482 |
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| Protein GI | 170723794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.688874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0837107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GCAGTCTGAT CAAGGCCTTT ACCCTCAGCG CATCGATTGC GGCGATGGGC
CTTAGCTGGA GCATCCAGGC CGCCGAGACC ATCAAGGTCG GCATCCTGCA TTCGCTGTCC
GGGACCATGG CGATTTCCGA AACATCGCTC AAGGACATGG CGCTGATGAC CATCGACGAG
ATCAACGCCA AGGGCGGGGT CAACGGCAAG ATGCTCGAAC CGGTGGTGGT CGACCCTGCA
TCCAACTGGC CGCTGTTCGC CGAAAAGAGC CGCCAGCTGC TGACCCAGGA CAAGGTCGCG
GTTGTGTTCG GCTGTTGGAC CTCGGTGTCA CGCAAGTCGG TGCTGCCAGT GTTCGAAGAG
CTCAACGGCT TGCTGTTCTA CCCGGTGCAG TACGAAGGTG AAGAGATGTC GCCGAACGTC
TTCTACACCG GCGCCGCGCC CAACCAGCAA GCGATTCCGG CCGTGGAATA CCTGATGAGC
GAAGACGGCG GCAGCGCCAA GCGTTTCTTC CTGCTCGGCA CCGACTACGT CTACCCGCGC
ACCACCAACA AAATTCTGCG CGCCTTCCTG CACAGCAAAG GCGTGGCCGA CAAGGATATC
GAAGAGGTCT ACACGCCGTT CGGCCACGCC GATTACCAGA CCATTGTCGC CAACATCAAG
AAGTTCTCGG CAGGCGGCAA AACCGCCGTT ATCTCCACCG TCAACGGCGA CTCCAACGTA
CCGTTCTACA AAGAGCTGGC CAACCAGGGC CTGAAAGCCA CCGACGTACC GGTGGTGGCG
TTCTCGGTGG GTGAAGAGGA ACTGCGCGGC ATCGACACCA AGCCGCTGGT AGGCCACCTC
GCCGCCTGGA ACTACTTCGA ATCGGTGGAT AACCCGGTCA ACCAGAAGTT TGTCGCCGAC
TGGAAGGCCT ACGCCAAAGC CAAGAACCTG CCGGGTGCCG ACAAGGCCGT GACCAACGAC
CCGATGGAAG CCACCTACGT GGGCATCCAC ATGTGGGCGC AAGCGGCGGA AAAAGCCAAG
TCCACCGATG TCGACAAGGT ACGCGAAGCC CTGGGTGGGC AAACCTTCAA GGCACCGTCC
GGCTTCACCC TTACCATGGA CAAGACCAAC CACCACCTGC ACAAGCCGGT AATGATCGGC
GAAATCCAGG ATGACGGGCA GTTCAGCGTG GTCTGGGAAA CCGAACAACC GCTGCGCGCG
CAGCCGTGGA GCCCGTTCAT TCCGGGCAAC GACAAGCGCC CTGACTATGC AGTGAAAGGC
AACTGA
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| Protein sequence | MKRRSLIKAF TLSASIAAMG LSWSIQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE
INAKGGVNGK MLEPVVVDPA SNWPLFAEKS RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EDGGSAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVADKDI EEVYTPFGHA DYQTIVANIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFESVD NPVNQKFVAD
WKAYAKAKNL PGADKAVTND PMEATYVGIH MWAQAAEKAK STDVDKVREA LGGQTFKAPS
GFTLTMDKTN HHLHKPVMIG EIQDDGQFSV VWETEQPLRA QPWSPFIPGN DKRPDYAVKG
N
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