| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4632 |
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| Symbol | |
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| ID | 6113613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5117019 |
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| End bp | 5118425 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624438 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001751481 |
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| Protein GI | 170723793 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.75325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0825274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA CCTCTTCCCC TCCTGCTCAA GCGCAGCACC TGCAGCGTAA CCTGACCAAC
CGCCACATCC AGCTGATCGC CATCGGTGGC GCCATCGGCA CCGGCCTGTT CATGGGCTCG
GGCAAGACCA TCAGCCTGGC GGGGCCGTCG ATCATCTTCG TCTACATGAT CATCGGCTTC
ATGCTGTTCT TCGTCATGCG CGCCATGGGC GAACTGCTGC TGTCGAACCT CAACTACAAG
TCGTTCATCG ATTTCTCGGC CGACCTGCTC GGCCCCTGGG CCGGCTACTT CACCGGCTGG
ACCTACTGGT TCTGCTGGGT TGTCACCGGT ATTGCCGACG TGGTCGCCAT CGCCGCTTAC
ACGCAATTCT GGTTTCCGGA CCTGCCACAG TGGATACCCG CGCTGACCTG CGTTGCAGTA
CTGCTGTCGC TTAACCTGGT TACCGTGAAG ATGTTCGGCG AGATGGAGTT CTGGTTCGCC
CTGATCAAGA TAGTCGCCAT CCTCGGCCTG GTCGCCACCG GCCTGTACAT GGTCATCACC
GGCTTCGAAT CGCCGAGCGG GCGCACCGCG CAGCTGGCCA ACCTGTGGAA TGACGGCGGC
ATGTTCCCCA ACGGCCTGAT GGGCTTCTTC GCCGGCTTCC AGATTGCCGT GTTCGCCTTC
GTCGGCATCG AGCTGGTCGG CACCACCGCC GCCGAAGCCA AGAACCCTGA ACGCACCCTG
CCAAGGGCGA TCAACTCGAT ACCGATCCGT ATCATCGTGT TCTACGTGCT GGCACTGATC
GCGATCATGG CTGTCACTCC ATGGCGCGAC GTGGTGCCGG GCAAGAGCCC GTTCGTCGAA
CTGTTCGTGC TGGCCGGCCT GCCGGCGGCG GCGAGCATCA TCAACTTCGT GGTGCTGACC
TCGGCGGCCT CATCGGCCAA CAGCGGCGTC TTTTCCACCA GCCGCATGCT CTTCGGCCTG
GCCCAGGAAG GCGACGCACC GCGCGCATTC GAAAAACTGT CGAGCCGCGC CGTACCGGCC
AACGGCCTGT ACTTCTCGTG CACCTGCCTG CTGCTTGGCG CGGTGCTGAT CTACATGGTG
CCGAACGTGA TCGAGGCATT CACCCTGGTC ACCACGGTTT CCGCAGTGCT GTTCATGTTT
GTCTGGACGC TGATCCTGCT GTCGTATCTG AAGTACCGCA AAACCCGTGC GGCGCTGCAC
CAGGCATCGA CCTACAAGAT GCCGGGCGGG CGCTTCATGT GCTACGTGTG CCTGGCGTTC
TTCGCCTTCA TCCTGGTGCT GCTGAGCCTG GAAGCGGACA CCCGCTCTGC GCTGATCGTC
ACGCCGATCT GGTTCGTGTT GCTGGCCGTC ACCTACCAGG GTGTGCGTAG CAAGCGCCAT
CCGCGGACAG CTGTGCGCAA CAGCTGA
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| Protein sequence | MTRTSSPPAQ AQHLQRNLTN RHIQLIAIGG AIGTGLFMGS GKTISLAGPS IIFVYMIIGF
MLFFVMRAMG ELLLSNLNYK SFIDFSADLL GPWAGYFTGW TYWFCWVVTG IADVVAIAAY
TQFWFPDLPQ WIPALTCVAV LLSLNLVTVK MFGEMEFWFA LIKIVAILGL VATGLYMVIT
GFESPSGRTA QLANLWNDGG MFPNGLMGFF AGFQIAVFAF VGIELVGTTA AEAKNPERTL
PRAINSIPIR IIVFYVLALI AIMAVTPWRD VVPGKSPFVE LFVLAGLPAA ASIINFVVLT
SAASSANSGV FSTSRMLFGL AQEGDAPRAF EKLSSRAVPA NGLYFSCTCL LLGAVLIYMV
PNVIEAFTLV TTVSAVLFMF VWTLILLSYL KYRKTRAALH QASTYKMPGG RFMCYVCLAF
FAFILVLLSL EADTRSALIV TPIWFVLLAV TYQGVRSKRH PRTAVRNS
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