| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4595 |
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| Symbol | |
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| ID | 6113576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5076303 |
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| End bp | 5077640 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624401 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001751444 |
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| Protein GI | 170723756 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.122276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAA TTGCCACCGA CTGGCAGCAC CGCCTCACCC ACCGCAAAGT CTGGGCCCTG
GCCGCGCCGA TGATTCTGTC CAACATCTCG GTGCCCTTGG TGGCCCTGGT AGATAGCACG
GTTATCGGTC ACCTGCCCCA CGCCCATCAG CTTGGCGCGG TGGCGGTGGG TGCCACGCTG
TTCACTTTCA TGGTCGGGCT GATGGGCTTC CTGCGCATGG GCTCCACCGG TTTCGCCGCC
CAAGCCGCAG GGCGTGCCGA CGGTGCTGCG TTGCGCCAGG TTCTGGTGCA AGGCCTGCTG
CTGGCGGTGG GCTTTGCCTT GTTCATCGGC CTGCTCGCTC TGCCCTTAAG CCAACTGGCG
CTGCACGCGA TGCAACCGAG CCAAGCCTTG CAGCAATCAG CCGAGGCCTT CTTCCATACC
CGCCTGCTCG GACTGCCGGC GGCGCTGGCC AGCTACGCGC TGGTCGGCTG GTTCCTCGGC
ACCCAGAATG CCCGAGCACC GCTTGCCATA TTGCTGACCA CCAACCTGCT GAACATCGTC
CTCAACCTAT GGTTCGTTCT TGGCCTTGAT TGGGGAGTGC TGGGGTCGGC GCGGGCGTCG
GTGATCGCCG AGTGGTCGGC CGCACTGCTG GGCCTGGCCC TGACCCGCCC TGCCCTGCGC
GCCTATCCCG GGCATATCGC CTGGGCGGCA CTCAAGCGCT GGCAAGCCTG GCGGCCGTTG
CTATCGGTCA ACCGCGATAT CTTCCTGCGC AGCCTGGCCT TGCAGCTGGT GTTCCTGCTT
ATCACCGTGC AAGGCGCGCG ACTGGGCGAG GCCACGGTGG CGGCCAATGC ACTGCTGTTC
AACGGCCTGC TGCTCACCGC CTACGCCCTC GACGGGCTGG CGCATGCCGT GGAAGCCCTG
TGCGGCCATG CTATCGGCGC CCGCGATCGC GACACCCTGC GCCGCTCGCT GGTGGTGGCC
TGTGGATGGT CATTGATTAC CAGTCTGGGT TTTGCCGGGC TGTTCCTGCT GGCCGGGCAT
GTGTTCATCG ACCTGCAGAC CGATATCGAG AGTGTGCGCG CGGCCGCCTA TCCGTACCTG
CCGTACCTGG CGGTACTGCC ATTGGTAGCG GTGTGGAGTT ACTTGCTGGA CGGCCTGTTC
ATCGGTGCCA CGCGGGCGCG GGAGATGCGC AATGCAATGC TGGTTTCGGT GCTGGTTGCA
TTGCCGCTGG CGTGGGCCAT GAGTGGGTTT GGCAACCACG GCTTGTGGTT TGCGTTTCTC
GGGTTCATGG CGTTGCGGGC GCTGACGTTG GGATGGGTGG GTTGGCGCCT GCAACGAAAA
GGACTGTGGA TTCACTAA
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| Protein sequence | MSQIATDWQH RLTHRKVWAL AAPMILSNIS VPLVALVDST VIGHLPHAHQ LGAVAVGATL
FTFMVGLMGF LRMGSTGFAA QAAGRADGAA LRQVLVQGLL LAVGFALFIG LLALPLSQLA
LHAMQPSQAL QQSAEAFFHT RLLGLPAALA SYALVGWFLG TQNARAPLAI LLTTNLLNIV
LNLWFVLGLD WGVLGSARAS VIAEWSAALL GLALTRPALR AYPGHIAWAA LKRWQAWRPL
LSVNRDIFLR SLALQLVFLL ITVQGARLGE ATVAANALLF NGLLLTAYAL DGLAHAVEAL
CGHAIGARDR DTLRRSLVVA CGWSLITSLG FAGLFLLAGH VFIDLQTDIE SVRAAAYPYL
PYLAVLPLVA VWSYLLDGLF IGATRAREMR NAMLVSVLVA LPLAWAMSGF GNHGLWFAFL
GFMALRALTL GWVGWRLQRK GLWIH
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