| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4558 |
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| Symbol | lspA |
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| ID | 6113534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5026294 |
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| End bp | 5026809 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624359 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001751407 |
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| Protein GI | 170723719 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.21418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAACC CTGCAGCGGG GCGCTTCGGG CGCCTTGCAT GGCTCTGGCT CAGCCTGCTG
GTCCTGGTCG TTGACCAGGC CACCAAGCTG TATTTCAACA ACGCCCTGAG CATGTATCAG
CAGATCGTGG TCATCCCTGA CTACTTCAGC TGGACCCTGG CCTACAACAC CGGCGCGGCT
TTCAGCTTCC TTGCCGACAG CTCCGGCTGG CAGCGCTGGT TGTTCGCCCT GATCGCCGTG
GTGGTCAGCG CCGTGCTGGT GGTCTGGCTC AAGCGCCTGG GGCGCAACGA GACCTGGCTG
GCCGTGGCGC TGGCGCTGGT GCTCGGTGGA GCGCTGGGCA ACCTGTACGA TCGAATCGTG
CTGGGCCATG TGGTGGATTT CATCCTGGTG CACTGGAAGA ACGTTCATCA CTTCCCGGCC
TTCAATGTGG CCGACAGCGC CATCACCGTT GGTGCGGTGA TGCTGGCGCT GGATATGTTC
AAGAGCAAGA AGTCCGAGGA TCCGGTCCAT GACTGA
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| Protein sequence | MPNPAAGRFG RLAWLWLSLL VLVVDQATKL YFNNALSMYQ QIVVIPDYFS WTLAYNTGAA
FSFLADSSGW QRWLFALIAV VVSAVLVVWL KRLGRNETWL AVALALVLGG ALGNLYDRIV
LGHVVDFILV HWKNVHHFPA FNVADSAITV GAVMLALDMF KSKKSEDPVH D
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