| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4551 |
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| Symbol | |
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| ID | 6113527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5022586 |
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| End bp | 5022975 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624352 |
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| Product | type IV pili biogenesis protein PilE |
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| Protein accession | YP_001751400 |
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| Protein GI | 170723712 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.402137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAG GCCTGAGCCT GATCGAGTTG TTGATTGTCG TGGCTGTCAC CGGCATTCTG
GCAGCCATTG CCTACCCCAG TTACAGCGAC CAGCTCAGGC GAGCCGCACG CAGCGAAGTG
GTTGGCCTGC TGCATGACGC TGCCCTGCGC CTGGAACACC ATCGTGTACG CACCGGCCAG
TACGCCGAGG GCGAACCGGT ATTGCCCGCT GGCAACCGCC ATTACAGCCT GCATGCCGAA
CGCGGTAGCG ATACCTTCAC GCTGCGTGCA CGGCGGCTGC CGCATGGTTT GATGGCGGAC
GATCGCTGCG GTGATTTCCA GCTCGACCAG GCCGGTGTAC AGAGCAACCC GGAGGGCACC
GGGGCCATTG AGCGCTGCTG GGGGAGCTGA
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| Protein sequence | MQQGLSLIEL LIVVAVTGIL AAIAYPSYSD QLRRAARSEV VGLLHDAALR LEHHRVRTGQ
YAEGEPVLPA GNRHYSLHAE RGSDTFTLRA RRLPHGLMAD DRCGDFQLDQ AGVQSNPEGT
GAIERCWGS
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