| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4550 |
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| Symbol | |
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| ID | 6113526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5021435 |
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| End bp | 5022532 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624351 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001751399 |
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| Protein GI | 170723711 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.387961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AAGTAGTGGT GGTCGGCGGC GGGGTGATCG GCCTGCTGAC GGCGTTCAAC
CTGGCGACGA AGGTCGGCCA GGTAGTGGTA TGTGATCAGG CCGAGGTCGG GCGTGAGTCG
TCCTGGGCGG GCGGCGGTAT CGTCTCGCCG CTTTACCCTT GGCGCTACAG CCAGGCAGTC
ACCGCCCTGG CGCACTGGTC GCAGGACTTT TATCCACAGC TGGGTGAGCA CCTGTTCTCC
AGCACCGGTA TTGATCCGCA AGTCCACACC ACCGGCTTGT ACTGGCTCGA CCTGGACGAC
GAAGCCGAGG CGCTGGCCTG GGCTGAGCGC GAGCAGCGGC CGCTCAGCCC TGTGGATATC
TCGGCGGCCT ATGATGCGGT CCCCGTACTG GGCCCAGGCT TCAAGCGCGC CATCTACATG
GCAGGCGTGG CCAATGTGCG CAACCCGCGG CTGGTCAAGG CACTGAAGGC TGCGCTGCTG
GCAATGCCCA ACGTGACCTT GCGCGAGCAC TGCCAGATCA CCGGCTTTGT TCAGGACGGT
GAGCGCGTGA CTGGCGTGCA GACCGCAGAC GGCGTGCTGC AGGCTGATGA TGTCGTGCTC
AGCGCTGGTG CCTGGAGCGG CGACCTGCTG CGCACGCTGG GCATTGAGCT GCCGGTGGAA
CCGGTTAAAG GCCAGATGAT CCTGTTCAAG TGCGCCGAAG ATTTCTTGCC GAGCATGGTG
CTGGCCAAGG GGCGTTATGC AATCCCGCGC CGTGACGGGC ACATTTTGGT GGGCAGCACG
CTGGAGCATG CGGGGTACGA CAAGACCCCG ACCCAGGATG CACTGGCGAG CCTCAAGGCT
TCAGCGGCAG AGTTGTTGCC GGAGCTTGCG GATGCCACGG TGGTGGCGCA CTGGGCCGGG
CTGCGGCCAG GTTCGCCTGA AGGCATTCCG TACATCGGCC AAGTGCCGGG GCATGACGGG
TTGTGGTTGA ATTGCGGGCA TTACCGCAAT GGGTTGGTGC TGGCGCCGGC TTCGTGTCAG
TTGTTTACTG ATTTGCTGAC GGGGGTGGAG CCGATCATTG ACCCGGCGCC TTATGCCCCT
GCCGGGCGTC TGGGCTGA
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| Protein sequence | MNKQVVVVGG GVIGLLTAFN LATKVGQVVV CDQAEVGRES SWAGGGIVSP LYPWRYSQAV
TALAHWSQDF YPQLGEHLFS STGIDPQVHT TGLYWLDLDD EAEALAWAER EQRPLSPVDI
SAAYDAVPVL GPGFKRAIYM AGVANVRNPR LVKALKAALL AMPNVTLREH CQITGFVQDG
ERVTGVQTAD GVLQADDVVL SAGAWSGDLL RTLGIELPVE PVKGQMILFK CAEDFLPSMV
LAKGRYAIPR RDGHILVGST LEHAGYDKTP TQDALASLKA SAAELLPELA DATVVAHWAG
LRPGSPEGIP YIGQVPGHDG LWLNCGHYRN GLVLAPASCQ LFTDLLTGVE PIIDPAPYAP
AGRLG
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