| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4546 |
|---|
| Symbol | |
|---|
| ID | 6113522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5018142 |
|---|
| End bp | 5018882 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641624347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001751395 |
|---|
| Protein GI | 170723707 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGCT TGACGCAGGC GCTGCTGTTC CCCGACTGGC CGGCCCCGGC CTCGGTTCGC
GCCTGTGTCA CCACCCGCCA GGGTGGCATT AGCCTGCCGC CCTATGAATC CTTCAACCTC
GGTGACCACG TGGGCGACGA CCCGCTTGCG GTCGCCGAGA ACCGCCGCCG CCTGAGCGAC
GAATTTGCCA TTCAGCCCGC CTGGCTCAAG CAGGTGCATG GCCTGATCGT GGCGGATGCC
GACCCATCGG TGGTCGCCGA AGCCGACGCC AGCTGGACCG ACCAGCCAGG CATTGCCTGT
ACCGTAATGA CTGCCGACTG CCTGCCCGTG CTGTTCTGCG ACCGCGCGGG CACCCGTGTG
GCTGCCGCAC ATGCGGGCTG GCGCGGGCTG GCCGGTGGCG TGCTGGAAAC CACGCTGGAG
CGCCTGGCAT TGCCGCCTGA AGAGGTGCTG GTGTGGTTGG GGCCTGCCAT CGGCCCGCAG
GCATTCGAAG TGGGCCTGGA AGTGCGGGAT GCCTTCACCG CTGTGCACCC GGAGGCTGCC
AAGGCCTTTG TCGAGGGCGA GCGGCCGGGC AAGCTGATGG CCGACATCTA TGCGCTGGCG
CGCATTCGCC TGGCGGCGCG CGGTGTGACA GCTGTTTATG GCGGTGGCTT TTGCACCGTC
AGCGATGAGC GGTTTTTCTC CTATCGCCGC ACCCCACAGG GTGGGCGGTT TGCTTCTTTG
GTCTGGCTGG ATCCTCGCTG A
|
|---|
| Protein sequence | MSGLTQALLF PDWPAPASVR ACVTTRQGGI SLPPYESFNL GDHVGDDPLA VAENRRRLSD
EFAIQPAWLK QVHGLIVADA DPSVVAEADA SWTDQPGIAC TVMTADCLPV LFCDRAGTRV
AAAHAGWRGL AGGVLETTLE RLALPPEEVL VWLGPAIGPQ AFEVGLEVRD AFTAVHPEAA
KAFVEGERPG KLMADIYALA RIRLAARGVT AVYGGGFCTV SDERFFSYRR TPQGGRFASL
VWLDPR
|
|---|
| |