| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4544 |
|---|
| Symbol | |
|---|
| ID | 6113517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5013169 |
|---|
| End bp | 5014464 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624342 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001751393 |
|---|
| Protein GI | 170723705 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.939793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATC GCATCGTGAT TGTCGGCGGC GGCGCCGGCG GCCTGGAACT GGCGACCCGC
CTGGGTAAAA CCCTCGGCAA GCGCAAGCAG GCCGAGATCA CCCTGGTCGA CGCCAACCTC
ACGCACATCT GGAAGCCGCT GCTGCACGAA GTGGCCGCCG GCTCGCTCAA CTCCTCGGAA
GACGAACTGA ACTACGTGGC CCAGGCCAAG TGGAACCACT TCAACTTCCA GCTGGGGCGC
ATGAGCGGCC TGGACCGTGA AGGCAAACAG ATCCAGCTGG CCGCCACCCT TGATGAAGAG
GGCCGCGAGC TGGTGCCTGC GCGAACCTTG CGCTATGACA CCCTGGTCAT TGCCGTGGGC
AGCAACACCA ACGACTTCGG TACCCTTGGC GCCGCGCAGC ACTGCCTGTT CCTAGATACC
CGCAAGCAGG CCGAGCGTTT CCACCAGCAA CTGCTCAACC ACTACCTGCG TGCCCATGCG
GGTGACCAGG CTAGCGAGAA AATCAGCGTG GCGATTGTCG GCGCCGGTGC CACCGGTGTG
GAGCTGGCGG CCGAACTGCA CCACGCAGCG CACGAACTGG CGGCTTATGG CCTGGACCGT
ATCCAGCCAA AGGACATGCA CATCACCGTG ATCGAGGCAG GCCCGCGCGT GCTGCCTGCG
CTGCCAGAGC GCATCAGCGT CCCGGTGCAC AAGACCCTGG AAAAGCTCGG CGTGACGGTG
ATGACCAACG CTGCCGTCAG CGAAGTGACC GCCGATGGCC TGAAGACCGC CAACGGCGAA
GTGATCCAGG CCAGCCTCAA GGTGTGGGCG GCCGGTATTC GTGCGCCGGG CTTCCTCAAG
GATATCGACG GCCTGGAAAC CAACCGTATC AACCAGCTGG TGGTGCGCCC TACCCTGCAA
ACCACCCGCG ACGATGACAT CTTCGCCTTC GGTGACTGTG CAGCCTGCCC GCAACCGGGC
AGCGACCGCA ACGTGCCGCC ACGCGCCCAG GCAGCGCACC AGCAGGCCGA GATGCTGGCC
AAGAGCCTGA AAGCGCGCCT GGAGAACAAG CCGCTGCCGA CCTATGCCTA CAAGGATTAC
GGTTCGCTGG TGTCGCTGTC GCGCTTCTCG GCGGTGGGTA ACCTGATGGG CAACCTGATG
GGTAGCGTGA AGCTGGAAGG CTGGCTGGCG CGGATGTTTT ATGTGTCGCT TTATCGCATG
CACCAGATGG CGCTGTACGG GTTCTTCCGC ACGGCGATGA TGATGCTGGG TAGCAAGATT
GGGCGGGGCA CTGAGCCGCG ACTGAAGCTG CACTGA
|
|---|
| Protein sequence | MTHRIVIVGG GAGGLELATR LGKTLGKRKQ AEITLVDANL THIWKPLLHE VAAGSLNSSE
DELNYVAQAK WNHFNFQLGR MSGLDREGKQ IQLAATLDEE GRELVPARTL RYDTLVIAVG
SNTNDFGTLG AAQHCLFLDT RKQAERFHQQ LLNHYLRAHA GDQASEKISV AIVGAGATGV
ELAAELHHAA HELAAYGLDR IQPKDMHITV IEAGPRVLPA LPERISVPVH KTLEKLGVTV
MTNAAVSEVT ADGLKTANGE VIQASLKVWA AGIRAPGFLK DIDGLETNRI NQLVVRPTLQ
TTRDDDIFAF GDCAACPQPG SDRNVPPRAQ AAHQQAEMLA KSLKARLENK PLPTYAYKDY
GSLVSLSRFS AVGNLMGNLM GSVKLEGWLA RMFYVSLYRM HQMALYGFFR TAMMMLGSKI
GRGTEPRLKL H
|
|---|
| |