| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4513 |
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| Symbol | glyA |
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| ID | 6113485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4982630 |
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| End bp | 4983883 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624310 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001751362 |
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| Protein GI | 170723674 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0695784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCC GTGATTTGAC CATTGCCAAG TACGACGCCG AGCTCTTCGA AGCCATGCAG
CAAGAAGCTC TGCGCCAGGA AGAGCATATC GAGCTGATCG CTTCGGAAAA CTACACCAGC
CCAGCCGTCA TGGAAGCCCA GGGTTCGGTC CTGACCAACA AGTACGCCGA AGGCTACCCG
GGCAAGCGTT ACTACGGTGG TTGCGAGTAC GTCGACGTGG TCGAGCAACT GGCCATCGAC
CGCGCCAAGG AGCTGTTCGG CGCCGACTAC GCCAACGTTC AGCCGCACGC CGGCTCCCAG
GCCAACGCCG CTGTCTACCT GGCCCTGCTG TCGGCCGGTG ACACCATCCT GGGCATGAGC
CTGGCCCACG GTGGCCACCT GACCCACGGT GCTTCGGTAA GCTCCTCGGG CAAGCTGTAC
AACGCCATCC AGTACGGCAT CGATGCCAAC GGCCTGATCG ACTACGACGA AGTCGAGCGC
CTGGCCGTCG AGCACAAGCC GAAAATGATC GTTGCCGGCT TCTCGGCCTA CTCGCAGGTC
CTGGACTTCC CGCGCTTCCG CGCCATCGCC GACAAAGTAG GTGCCTACCT GTTCGTCGAC
ATGGCCCACG TTGCCGGCCT GGTTGCCGCT GGCGTGTACC CGAACCCGGT GCCGTTCGCC
GACGTGGTCA CCACCACCAC CCACAAGACC CTGCGCGGCC CGCGTGGCGG CCTGATCCTG
GCCCGTGCCA ACGCCGACAT CGAGAAGAAG CTGAACTCCG CCGTCTTCCC GGGCGCCCAG
GGCGGCCCGC TGGAGCACGT CATCGCGGCC AAGGCCATCT GCTTCAAGGA AGCCCTGCAG
CCTGAGTTCA AGGCTTACCA GCAGCAAGTG GTGAAGAACG CCCAGGCCAT GGCCAGCGTG
TTCATCGAGC GTGGTTTCGA CGTCGTTTCC GGCGGCACCC AGAACCACCT GTTCCTGCTG
TCGCTGATCA AGCAGGAAAT CTCCGGTAAG GACGCTGACG CCGCCCTGGG CAAAGCCTTC
ATCACCGTCA ACAAGAACTC GGTACCTAAC GACCCACGTT CCCCGTTCGT GACCTCGGGC
CTGCGTTTCG GCACCCCGGC CGTCACCACC CGCGGCTTCA AAGAAGCCGA GTGTAAAGAA
CTGGCCGGCT GGATCTGCGA CATCCTCGCC GACCTGAACA ACGACGCCGT CATCGACGCC
GTACGTGAAA AGGTCAAGGC CATCTGCAAG AAGCTGCCGG TGTACGGCAA CTGA
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| Protein sequence | MFSRDLTIAK YDAELFEAMQ QEALRQEEHI ELIASENYTS PAVMEAQGSV LTNKYAEGYP
GKRYYGGCEY VDVVEQLAID RAKELFGADY ANVQPHAGSQ ANAAVYLALL SAGDTILGMS
LAHGGHLTHG ASVSSSGKLY NAIQYGIDAN GLIDYDEVER LAVEHKPKMI VAGFSAYSQV
LDFPRFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL
ARANADIEKK LNSAVFPGAQ GGPLEHVIAA KAICFKEALQ PEFKAYQQQV VKNAQAMASV
FIERGFDVVS GGTQNHLFLL SLIKQEISGK DADAALGKAF ITVNKNSVPN DPRSPFVTSG
LRFGTPAVTT RGFKEAECKE LAGWICDILA DLNNDAVIDA VREKVKAICK KLPVYGN
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