Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4498 |
Symbol | |
ID | 6113470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4964290 |
End bp | 4965258 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624295 |
Product | polyprenyl synthetase |
Protein accession | YP_001751347 |
Protein GI | 170723659 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.507536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCC AAACCTTCTA CCGCGCGGTA GCTGACGATT TCAGCGCCGT CGACGAGATC ATCAAGAAGC AGCTGACCTC GCGCGTGCCG CTGGTATCGA AGATCGGCGA CTATATCACG TCGGCCGGCG GCAAACGCCT GCGCCCCCTG CTGGTGCTGC TGTGTGGCAA GGCCCTGGGC CGCGAGGGTG ACGACCTGCG CCTGCTCGCC GCAACCATCG AGTTCCTGCA CACCGCCACC CTGCTGCACG ACGATGTGGT CGACATGTCC GGCATGCGCC GCGGCCGCTC CACCGCCAAT GCCCTGTGGG GCAACGCACC GAGCGTGCTG GTGGGCGACT TCCTTTATTC GCGCTCGTTC GAAATGATGG TCGAGCTGGG CTCCATGCCG GTCATGCAGA TCCTCTCCAA GGCCACCCGG GTGATCGCCG AAGGCGAAGT GCTGCAGCTG TCGCGCGTGC GCGATGCCAG CACCAGCGAA GAGGTGTACA TGGAGGTCAT CCGCGGCAAG ACCGCGATGC TGTTCGAGGC CTCGACCCAC AGCGCCGCAG CGCTGGCCGG TGCCACCGAC GAGCAGCGCG AGGCGCTGCG CACCTTCGGC GACCACCTGG GCGTGGCTTT CCAACTGGTC GACGACCTGC TGGACTACAA AGGCGATTCG CAGACCCTGG GCAAGAACGT CGGCGACGAC CTGGCCGAAG GCAAGCCAAC CCTGCCGCTG ATCTACACCA TGCGCGAAGG CACGCCAGAG CAGGCTGCAC TGGTGCGCAA GGCGATCCAG AAGGGTGGCC TGGAAGACCT GGAGCAGATC CGCGTGGCGG TCGAAGCTTC GGGTGCGCTG GACTACACCG CGCAGCTGGC CCGTGATTAC GTGAAGCGGG CCATTGAGTG CCTGGAAGTG CTGCCGGCCA GCCAATACCG GGATGCACTG GTCGAGCTGA GTGAGTTTGC GGTAGCGCGC ACGCACTAA
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Protein sequence | MQPQTFYRAV ADDFSAVDEI IKKQLTSRVP LVSKIGDYIT SAGGKRLRPL LVLLCGKALG REGDDLRLLA ATIEFLHTAT LLHDDVVDMS GMRRGRSTAN ALWGNAPSVL VGDFLYSRSF EMMVELGSMP VMQILSKATR VIAEGEVLQL SRVRDASTSE EVYMEVIRGK TAMLFEASTH SAAALAGATD EQREALRTFG DHLGVAFQLV DDLLDYKGDS QTLGKNVGDD LAEGKPTLPL IYTMREGTPE QAALVRKAIQ KGGLEDLEQI RVAVEASGAL DYTAQLARDY VKRAIECLEV LPASQYRDAL VELSEFAVAR TH
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