Gene PputW619_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4484 
Symbol 
ID6113455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4950487 
End bp4951419 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID641624280 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001751333 
Protein GI170723645 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.656085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGA TGCCCGCCAC GCAGATCCAG GCCGACGCCC AACAGGAAGC ACTGGCGTGG 
TTCGCCCGCC TACGCCAACC TGACTGCGAT GACCATGAAC GCCAGGCATT CGCCCGCTGG
TGCCAGGCCC CGCTCAATGC CCATGCCTAC GCCGAGCTCG AAGCCTGCTG GCAGCAATTG
CAAGCGCCAC CGGCAGGGCC TCGACCGCGC CAGGTCACCG TGCGACGCAG CTACCTCGGC
AAAGGGCTGG CATTGCTGTT CCTACTGGCG CTGGCCGTGC TGACGTACCT GTACTGGCCA
CTGATGCAGC GCCTGGGCAG CGAACTGCAC ACTGGCGCTG GGGAGCGGCG CAGCGTGCGC
CTGGCCGACG GCTCAACCCT GCACCTGGAC AGCGCGAGTG CACTGAATGC CGACCTGCGC
GGGCGCACCC GTCTGCTGCA GGTTGTGCAG GGCCAGGTCG AGCTGCACGT GATGCTCGAC
GGCCGCGCCC TTGAACTGCA GGTGGACGAT GCGCGTATCC AGGTGTTCGG CACTCGCCTG
ATGGTGGCGC GCCATGCCGG GCATGACGAA CTGGTGGTGC TCAATGGCAA GGCCATGATC
ACCCAAGGTA ACGACCAGCG CATGGTGTCG GCGAGTGAGC GGGTGACCTT CACCGATGCC
CGGATCAACC CCGTGCAGAA GGTCGATGTC AAAAATGCGA ACGCCTGGCG CAGCGGCCAC
CTGCGCGCCC TCGACGTGCC ATTGGGTCAA GTCATCGAGC GCCTGGCCAG CTACCAGGGC
CGCCGCGTAT GGATGATGGA CGAACAGGCA GCCAACCGGC GTGTAAGCGG CGACTTCAAC
CTCGACCGCT CCGGCGCAAC CCTCGACGCA CTGGCTGCCG AGCAGCGCTT GCAGGTGTAC
GGTATTCTCG GGCAATGGTT GATCGTGCGC TGA
 
Protein sequence
MSPMPATQIQ ADAQQEALAW FARLRQPDCD DHERQAFARW CQAPLNAHAY AELEACWQQL 
QAPPAGPRPR QVTVRRSYLG KGLALLFLLA LAVLTYLYWP LMQRLGSELH TGAGERRSVR
LADGSTLHLD SASALNADLR GRTRLLQVVQ GQVELHVMLD GRALELQVDD ARIQVFGTRL
MVARHAGHDE LVVLNGKAMI TQGNDQRMVS ASERVTFTDA RINPVQKVDV KNANAWRSGH
LRALDVPLGQ VIERLASYQG RRVWMMDEQA ANRRVSGDFN LDRSGATLDA LAAEQRLQVY
GILGQWLIVR