| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4481 |
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| Symbol | |
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| ID | 6113452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4944930 |
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| End bp | 4947404 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624277 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001751330 |
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| Protein GI | 170723642 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.207643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.919252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACC CGTGTTCCCC CCGCAACGAC AGGCTGCGCC ATGCCGTGCG CGCCGCCGTG
TTCGGCCTCG GCCTAGGCAG CGCCTTGGCA TTGCCCGCAC AGGTCGCGGC TGCACCCGCC
AGCCAGCACC GGCAAATCGA CTGGAGCATC CCCGCAGGCC CTCTGGCCCC TGCACTGGAC
CAGTTGGCGC GGCAAGGCGG CCTGAGCCTG TCGTTCGATG CGAACAGCCT GCAGGGCAAG
ACCACCCAGG GCGTGCAGGG CCGCCATGAG CCGGCCCAAG CATTGACCCT CGTGCTGATG
GGCAGCGATG TGCAAGCGCA ACAGGAAGGC GATAACAGCT TTCTACTGAT ACCAGCACTG
GACGCCGGTG GCGCACTGCA ACTGGGTACC ACCAGTATTT CCAGCGATCG CCTGGGCGAA
ACCACCGAGC ACAGTGGCTC TTACACGACA GGTGCGGTCA CCATCGGCAA GACCGCGCAA
AGCATTCGCA ACACCCCGCA GTCGGTGACC GTGGTCACCC GCCAGCGCAT CGACGACCAG
AACATCACCA ACCTGACCAA CCTGCTGGAG CAGACGCCTG GTGTGGTGGT GAACCTCACC
GACAGCGAAC GCGTGCAGTA CTACTCGCGC GGCTATGCGA TCGATGCCAT CCAGTACGAC
GGCGCCACCG TGGTGCAGGG CAGCGGCGGT GGCTCATTCA TCCAGAGCGA TTCGGCCATC
ATCGACCGCG CCGAGATCTT GCGCGGGGCC ACCGGCATGA TCCGCGGCGC GGGTAACCCG
TCAGGCACCG TCAACCTGGT GCGCAAACGC CCGACGCACG AATTCCAGGG CGAAGGCAGC
GTCACCCTCG GCTCCTGGGA TACCCAGCGT TATGTCGCCG ATATCTCCGG CCCGCTGACA
GAAACCGGGA ACGTGCGAGG CCGGGTGATC GCCGTACACG ATGACAAAGA CCATTTCCAG
GACTCGCGCC AAGAGCGCAA AGAGGTGTTC TACGGTGTGC TGGCCTTCGA TCTGAATGAC
AGCACCACCC TGACCACAGG CCTTGAGTGG ACCAAGCTCG ATGCCACCGG CGCTTGGGGC
AACCTGCCCG CCGACTATGA TGGGTCGCCC CTGCCGTTTG GCCGCAGCAC TTACCTGGGT
GCTGACTGGA ACCGCTGGGA CCGCAGCAAC CTGCAGACCT TTGCCGAGCT CGAACACCGT
TTCGACAACG ACTGGTCGCT CAAGCTGATG GCCCAGCGCA CGCACTTCGA GCTGGATGAC
CACGGTTTCA AGCAGACTTA CTTCACCCGC GCCAGCGGCG CTGCCAACCC AAGCAACAAC
CCCTATCTGA TGAACTATCA GGTTACCGAG GGCGACGGCG GCGAGAGCCT GCAGAACAAC
CTGAGCGCCA CCCTCAACGG GCCGTTCGAG CTGCTCGGTC GCACCCATGA CCTGATGCTT
GGTGTCGAGC GCATTCGCAA CGATTCCTAC GCCTCGGCCA CCAACTTCGT CTCCTCAGGG
GTCTTCGACA TCCGCGAGTG GGACCCAAAG ACCAGCCTGG CCGAACCGGA CATCAACATC
ACCGCACATC CGGTACGCAC ACGCACCACC CAGGAAGCGG CCTACGCCAC TTGGCGCATT
TCCCTGGCCG ACCCGCTCAC GGCAATCATC GGGGCGCGAG CCAACTGGTA TGACTACGAG
CAGGAAAACA ACGTCAAGTC GAACGGCAAG TTCAGCGTCG ACAACAAGAT CGTGCCGTAT
GCAGCGCTGA TCTACGACCT CAATGACAAC TTCAGTAGCT ACGCCAGCTA CACCGAAATC
TTCAACCCGC AGACCGCCAC CGACGTCAGC GGCTCGGTGC TGGAGCCAAC CACAGGCGAA
GCTTACGAGA CCGGAATCAA AGGCGAGTTC TACGAGGGGC GGCTGAACAC CTCGCTGGCG
TTCTTCCGCA TCTACCAGGT CGGCAACGCC CTGGATGACC TGAGCGGCCC CAACCCCTGC
CCGCCCAACT ACACCTCGGG TTATTGCAAG GTGGCTGCAG GCAAGAACCG CAGCCAAGGC
TTCGAGCTGG AGATTTCCGG CGAAGTATTG CCAGGCTGGA ACGTGACCGG TGGCTACACC
TACAACACCA CCAAGCAACT CAAGGACACC ATCAGCAACA CCGGCAACGC CATCCGCACC
ACAGACCCCA AGCGCATGCT GCGCCTGTTC ACCAGCTATC GCCTGCCGGG CGAGCTGCAA
GCGTGGACCG TTGGCGGCGG CGTGCAGGCG CAGAGCGACA TCTACAACCG CAGCGGCAGC
GCCGAGGCCT CGCAGGCCGG GTATGCGGTG TATAACGCGA TGGTCAACTA CCGGTTCAAC
GAGCATTACT CGTTGCAGCT CAATGCCAAC AATATCTTCG ACAAGAAGTA CTACCGCCAG
GTGGCGCCGA CGCCGACCGG GTATTACTGG GGTGACCCGC GCAATGTGTC AGTGACCTTG
CGCGGCAGCT TCTGA
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| Protein sequence | MIHPCSPRND RLRHAVRAAV FGLGLGSALA LPAQVAAAPA SQHRQIDWSI PAGPLAPALD
QLARQGGLSL SFDANSLQGK TTQGVQGRHE PAQALTLVLM GSDVQAQQEG DNSFLLIPAL
DAGGALQLGT TSISSDRLGE TTEHSGSYTT GAVTIGKTAQ SIRNTPQSVT VVTRQRIDDQ
NITNLTNLLE QTPGVVVNLT DSERVQYYSR GYAIDAIQYD GATVVQGSGG GSFIQSDSAI
IDRAEILRGA TGMIRGAGNP SGTVNLVRKR PTHEFQGEGS VTLGSWDTQR YVADISGPLT
ETGNVRGRVI AVHDDKDHFQ DSRQERKEVF YGVLAFDLND STTLTTGLEW TKLDATGAWG
NLPADYDGSP LPFGRSTYLG ADWNRWDRSN LQTFAELEHR FDNDWSLKLM AQRTHFELDD
HGFKQTYFTR ASGAANPSNN PYLMNYQVTE GDGGESLQNN LSATLNGPFE LLGRTHDLML
GVERIRNDSY ASATNFVSSG VFDIREWDPK TSLAEPDINI TAHPVRTRTT QEAAYATWRI
SLADPLTAII GARANWYDYE QENNVKSNGK FSVDNKIVPY AALIYDLNDN FSSYASYTEI
FNPQTATDVS GSVLEPTTGE AYETGIKGEF YEGRLNTSLA FFRIYQVGNA LDDLSGPNPC
PPNYTSGYCK VAAGKNRSQG FELEISGEVL PGWNVTGGYT YNTTKQLKDT ISNTGNAIRT
TDPKRMLRLF TSYRLPGELQ AWTVGGGVQA QSDIYNRSGS AEASQAGYAV YNAMVNYRFN
EHYSLQLNAN NIFDKKYYRQ VAPTPTGYYW GDPRNVSVTL RGSF
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