| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4480 |
|---|
| Symbol | |
|---|
| ID | 6113451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4943877 |
|---|
| End bp | 4944833 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641624276 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001751329 |
|---|
| Protein GI | 170723641 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.876181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCT CTGATCAAGT ACCTGCGCAG GCCCAGGTCG ACCAGGCCAT CGAATGGCTG
GTGAAGCTGC GCTTCGACAA CCCCAACCCG GCTACCGAAC AGCAGTTCCA GCAATGGTTG
GCCCACCACC CGCACAACGC CCAGGCCTGG CAGCGGGTGA GCACCCTCAG CGACGAGCTG
GCGGGGCTCC CCAGCGACCT TAGCCGGCGC ACCCTCGATG GCCGCCAGCG TCAGCGCATC
AACCGCCGTG ACCACCTCAA GCTGCTGGCG GTGCTGGCGA TCGGCGGCAG CGCCGGTTGG
GCCGCGCGCG AGCCGCTCGG CCTGCCCGCG CTGATGGCCG ACAACAGCAC CGGCACAGGC
GAGCGTCGCC GGTTGCAGGG TAGTGATGGC AGCCAGATCC AGCTCAACAC GGCCAGCGCC
ATCGACCTGC ACTACAGCGC CGAGCTGCGC GAACTGACCC TGCTGCGCGG CGAAGTCAGC
CTGGCCAGCA ACCCTGGCGA CAACCGCCCG TTCCGCATCA CCACCCGGGT CGGCGCCCTG
GCTACCCGTG ACGGCCAACT GCTGCTGCGC GAAAATGATC AGGGCCTGTT GCTGGCCGTG
CGCCGCGGCA AAGTCACCTT GTTCCCCACC TCCCCTTCAC CACGCGTGGT GCAGGCGGGC
GAGGTGTTGC AAGTATCGCC GCACGGGGCT CACGCGCTTG CCTCGTTGCA TGCCGACCCA
TGGGGCTGGA CCGACGGTGT GCTCAGCGTG CAACAGATGC CACTGGGCGA GTTCTGCGCC
GAACTGGCCC GCTACCGCCC GGGGCTGCTG CGCTGCGCTG GCGATGTGGC CGCGCTGAAG
GTATCCGGCA CTTACCAGCT GAACGATACC GAACAGATTC TGCAACTGCT TACCCGCAGC
CTGCCGGTAC GTGTCGATTA CCGCACACGC TATTGGGTCA GCGTCGGGGC TGCCTGA
|
|---|
| Protein sequence | MPSSDQVPAQ AQVDQAIEWL VKLRFDNPNP ATEQQFQQWL AHHPHNAQAW QRVSTLSDEL
AGLPSDLSRR TLDGRQRQRI NRRDHLKLLA VLAIGGSAGW AAREPLGLPA LMADNSTGTG
ERRRLQGSDG SQIQLNTASA IDLHYSAELR ELTLLRGEVS LASNPGDNRP FRITTRVGAL
ATRDGQLLLR ENDQGLLLAV RRGKVTLFPT SPSPRVVQAG EVLQVSPHGA HALASLHADP
WGWTDGVLSV QQMPLGEFCA ELARYRPGLL RCAGDVAALK VSGTYQLNDT EQILQLLTRS
LPVRVDYRTR YWVSVGAA
|
|---|
| |