| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4476 |
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| Symbol | |
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| ID | 6113447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4939040 |
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| End bp | 4941439 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624272 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001751325 |
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| Protein GI | 170723637 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.878237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGTG TCAGCCTTGC CCGATTTTAC CTGGTGGTAA TGGCCCTGAT GCTGGCGCTT
GCGTCGCCGG CCTGGTCGGC TTCCGTGCCG GTTGCCAACC TGGTTGCCAG CGAGCTGCCG
GTGCTGGATG AAAACGCAAG CATCGAGCAG TTGAGCGATA GGCTCGACCA GATTCGTCAG
GGCGTAACCA GCAACGCCAA TGACGATCTG CTCTCGCAAC TGCGCATGGC TACCGTGCAG
GTCCAGCGAC AGGCCGATGC GCTGAGTACC TTGCGCGCAG CCGACGCGCA GAAGCTCGAC
GACAAGCTCA AGGTCATCGG CCCGGTACAG AAAGATGAAG CCCCAACCCT GGCCTTGCAA
CGCAAGGAGC TGGAGGCGCA GAAAAAGTCG GTGCTCGCCG AGCAGGATCA GGCCACCAAG
CTGACCCAGT CGGCGCGCGA CCTGTCCACG CAAATCGTCA ACCTGCGCCG TAGCCAGTTC
AACTCGCAAG TTACCAGCCG GGCGGCCAGT CCGCTGAGCC CGGCCTTTTG GCAGTCGCTG
ATCCGTCCTA CCGAGGACGA TGTGATGCGC CTGCGTGATC TGCGCGGCGA GGCCGCCGAC
GCCGTCGCCA GCGCCTTCAG CGCTGAACAC CGCGGGTTCT TCATCACTAG CCTGGTGGCT
GCGATCCTGG TCTGGACACT GGTCCGCCTG GTTCTTGAGC GCCTGCTCGC TGCAGCCATG
ATCCGCTGGC TGCCCGAAGG CCGCCTACGC CGAAGCGCGC TGGCCTTGAG CGTGAGTCTG
GCCACCTTGG GCACTATCGC CGGCGCCGTG TCGCTGCTGC GTTGGGGCCT TCAAAGCAGT
GCCATGCTGG GCTCGGACAT AGCCAGCCTG ACCAACCACT TCCTCATGCT CGTGGTGTTC
AGTGCCTTCA TCACCGGCCT TGGCCGGGCC ATGTTGATGC TGCAACGGCC TTCCTGGCGC
CTGCCGCCGA TCCCCGACGA AGTGGCCAGT GCTCTGGGTT GGTTCCCCAA GTTGCTGGCC
CTGGCACTGA TGGTGATGCT GACCTTCGAG CGCATCAACA GTGTGATCGG CACCAGCCTG
GCGCTGACTG TCGCCACCAA CGGCCTGACC GCGCTGGTGG TAGCCGCCAT CTTCTCCGCG
GCGCTCATAC GTTACCGCCG GACCTTGCGC AAACATGAGC TGGCGCGCCC GACCGGCCTG
GCAGGGCTGA TCCCGTTCGT GATCGTGGTG TGGGTCGGGC TTATCGTGCT GACGCTGCTG
GCCGGCTACC TCACCCTGGC CTACTTCCTC ACGGCCAAGC TGCTGTGGAT CAGCATGGTC
GCCACCTGCG CCTACCTTTT GACCACCTTC CTGGCTGATC TGTGCGAAAC CCTGCTGTCG
CCGCGTCAAC CCGGCGGCCT GGCACTGGCG TCGTCGCTGG GCCTGGCACC ACGCCACCAG
GCCCAGGCCA GCACCATCCT GACCGGTGTC AGCCGCACGG TCCTGCTGTT CCTGGCGGTG
ATGCTGGCGT TGATGCCGTC GGGCACCAGC CCCGGCGAGT TGCTGATGAG CCTGGGCGAC
TGGGACGGCA CCGGTGGCAA ATTGCTCGGC AACCTGAACA TCGTGCCGCA GGACATCCTG
CTGGCCGTGG CGATGCTGTT AGGCGGCATG CTCGGTATCC GTGTACTCAA GCGCTGGCTG
AGCGAGCGCC TGCTGCCGGA AACCGACATG GACGCCGGCA TGCGTGCTTC GCTGGTAACC
CTGGTCGGTT ACCTGGGCTT CCTGTTCCTG GCCATGCTGG TGATGTCGAC CCTGCGGATC
AACCTCACCA GCCTGACCTG GGTAGTCAGC GCCCTGTCGG TGGGTATCGG TTTCGGCTTG
CAGCAGATCG TGCAGAACTT CATTTCCGGT CTGATCCTGC TAACCGAGCG CCCGGTCAAG
GTGGGCGATT GGGTGAGCCT GGCCGGCGTC GAGGGTGACA TTCGCCGGAT CAACGTGCGC
GCCACAGAGA TCCAGATGTC CGACCGCTCC ACGGTGATCG TGCCCAACTC GCAGTTCATC
TCGCAGAACG TGCGCAACGT AACCATGGGC AATGCCTTGG GTGTGGTGGG CATCACCCTG
ACCTTGCCGC TGGAGACCGA TGCCAACCAG GTTCGCGACC TGCTGCTGAC TGCCTTTCAC
GAGCATGAGG CGATCCTGGA TGCGCCGGCT GCGTCGGTAA CCTTCAAGGA CCTGACTACC
AGCGGCATGG TGATCAGTGT CAGCGGCTAT GTGGCGGGGC CGCGGCAGGT GTCGGGGGCG
CGCAGCGACC TGCTGTTCAC CATCCTGGGG CGTTTGCGGG ATGAGGGCAT TCCCCTGTCT
TCACCGCAGA GCATGGTGCT GGTGCAGGAG GGCGCGCGCC CGGCTGACGA GCCGGCGTAA
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| Protein sequence | MRRVSLARFY LVVMALMLAL ASPAWSASVP VANLVASELP VLDENASIEQ LSDRLDQIRQ
GVTSNANDDL LSQLRMATVQ VQRQADALST LRAADAQKLD DKLKVIGPVQ KDEAPTLALQ
RKELEAQKKS VLAEQDQATK LTQSARDLST QIVNLRRSQF NSQVTSRAAS PLSPAFWQSL
IRPTEDDVMR LRDLRGEAAD AVASAFSAEH RGFFITSLVA AILVWTLVRL VLERLLAAAM
IRWLPEGRLR RSALALSVSL ATLGTIAGAV SLLRWGLQSS AMLGSDIASL TNHFLMLVVF
SAFITGLGRA MLMLQRPSWR LPPIPDEVAS ALGWFPKLLA LALMVMLTFE RINSVIGTSL
ALTVATNGLT ALVVAAIFSA ALIRYRRTLR KHELARPTGL AGLIPFVIVV WVGLIVLTLL
AGYLTLAYFL TAKLLWISMV ATCAYLLTTF LADLCETLLS PRQPGGLALA SSLGLAPRHQ
AQASTILTGV SRTVLLFLAV MLALMPSGTS PGELLMSLGD WDGTGGKLLG NLNIVPQDIL
LAVAMLLGGM LGIRVLKRWL SERLLPETDM DAGMRASLVT LVGYLGFLFL AMLVMSTLRI
NLTSLTWVVS ALSVGIGFGL QQIVQNFISG LILLTERPVK VGDWVSLAGV EGDIRRINVR
ATEIQMSDRS TVIVPNSQFI SQNVRNVTMG NALGVVGITL TLPLETDANQ VRDLLLTAFH
EHEAILDAPA ASVTFKDLTT SGMVISVSGY VAGPRQVSGA RSDLLFTILG RLRDEGIPLS
SPQSMVLVQE GARPADEPA
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