Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4468 |
Symbol | |
ID | 6113439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4929880 |
End bp | 4931391 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641624264 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001751317 |
Protein GI | 170723629 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.151382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGC GCTGCTGTGG GTTGAGCCTG CTGATGGTGC TGGCCGGTTG CACCCAGGTC GGCCCGGACT ATGAGACGCC CCGGCACGCG TGGCTGGGCA GCTGGAGTAC GCCATTGCTC GAGCAGGCCC AGCGCAGGGC TGCGCAGCCG GAGCTGCGCC AGTGGTGGGC AGTGTTTGCC GACCCGGCCT TGGACGCACT GATCGCCGAG GCCGACGCCA ATAACACCAG CCTGCGCGTA GCCGGCCTGC GCGTCGCCGA GGCCAGGGCG CAGTTGGCCA TCGTCCAGAC CGGGCGTTAT CCACAGTTGC AGCAACTGCG CGGGCAGAGT CTGTACCTCA AACAGGACCA GTCCGGCACC GCCAGCGCCC GCGATTCGGT GTTCTGGCAG TCCAGCGCGG GTTTCGATAT CGGGTGGGAA ATCGATTTCT GGGGGCGTTT CAGCCGCGCC ATCGAAAGCG CCGATGCCGC TTATTTCGCG TCCCAGGCCA ATTACGCCGA CGCCATGCTG CTGATGCGTG CGCAGGTGGC CGACACCTAC TTTGCCCTGC GCACCGCCGA GGCGCGGCTG CAGATCGCAA CGGAAAACGC CAGGCGCCAG GCGCGTAGCC TGGAAATTAC CGAGCGGCTG TTCCGCCACG GCGAGAACGA CGAGCTCGAC TGGCAGCAGG CGCGTACCCA GTACCTGGCA ACTCAGGCCA CGATTCCCGA GTTCGAAAAC CAGCTCAATG CCTTGCGCAA TGTGCTCTGC GCGTTGCTTG ACAGACCGCC CGGGCCACTG CCGCAGCTGG CTGCGCGGTA CGGCCAGTTA CCGCTGCCGG ACCGGGCTGT GTTGCAGGAC GTGCCCGCCA GCCTGCTGCA GCGGCGCCCC GACATTCGTG CCGCCGAGCA AGCCGTGGCG GCGCAGTCGG CACTCGTCGG GGTGGCCACC GCGGATCTTT ATCCACAGCT GAGCCTGCTG GGCAGCATCG GCTGGACTTT CGTATCGGCC AATCAACTGC CCAACACCTT CGACCTGGCT GCCGGGCCAA GCCTGATATG GAGCCCCTTC GACTACGGCC GCCGCAAGAA TGCCGTGCGT GTCGAGGATG CGCGCCTGCA GCAGTTGATT GAGCTGTACC AGCAAGGGGT GCGTGAAGCT GCGCGTGAGG CCGATGACGC CGCCAGTGGT CTGGTGCGTT CGCTGCAGAG CGCCAGCATT CGCCAGGACG CCTCGCAGGC CGCTCAGCGC TCGCTGAACC TGGCCAGCGC CCAATACCAG GAAGGCTTCG CCGATTTCCA GCGCGTGCTC GATGCCCAGC AACTGCTGTT GCAGCAGCAG GACGGCTACC TGGTCAGCCG GGGGAACGCA GTGAGCAGCC TGGTGACGCT GTATAAAGCG CTGGGCGGTG GTTGGGACAA CCAGCGCAAG CCCGTTGACC CGGCCACCCG CCAGCAGATG GAAAACCGTA CCGATTGGGG TGACCTGCTG GACGAGCCGG CCCCCGCCGA CCCTGAACAA GGTGAGCCCT GA
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Protein sequence | MPRRCCGLSL LMVLAGCTQV GPDYETPRHA WLGSWSTPLL EQAQRRAAQP ELRQWWAVFA DPALDALIAE ADANNTSLRV AGLRVAEARA QLAIVQTGRY PQLQQLRGQS LYLKQDQSGT ASARDSVFWQ SSAGFDIGWE IDFWGRFSRA IESADAAYFA SQANYADAML LMRAQVADTY FALRTAEARL QIATENARRQ ARSLEITERL FRHGENDELD WQQARTQYLA TQATIPEFEN QLNALRNVLC ALLDRPPGPL PQLAARYGQL PLPDRAVLQD VPASLLQRRP DIRAAEQAVA AQSALVGVAT ADLYPQLSLL GSIGWTFVSA NQLPNTFDLA AGPSLIWSPF DYGRRKNAVR VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSASI RQDASQAAQR SLNLASAQYQ EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDNQRK PVDPATRQQM ENRTDWGDLL DEPAPADPEQ GEP
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