| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4467 |
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| Symbol | |
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| ID | 6113438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4928795 |
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| End bp | 4929880 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624263 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001751316 |
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| Protein GI | 170723628 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CCGTGGACAC GCCCCCTGAC CGCGCCATGC ACTGGGTGTT GGTGCTGATC
ATAGTGAGCC TGGTCTGGTA CCTGCTTGCC GACCGATTCA CGCCTTACAC CCAACAGGCT
CGTCTGCAAG CCTATGTGGT GCCTGTGGCC GCTGAAGTTG CCGGGCAGGT CAAGCGCGTG
GCGGTGGGCA ACAACCAGCA AGTGCGCCAG GGTGATGTGC TGTTCGAGCT GGATCAGGAG
CAGTACCGCA TTGCCCTGAC CCGCGCCCAG GCAGATCTGG ATACGGTACG CCGGCAGATT
GGCGCCAATA CCGCTGGCAT TGACTCGGCC CAGGCCGCCT TGGTAGCGGC TCAGGCCAAC
GAGCGCAAGG CCCGCCAGGA TGCCGAGCGG CTCAAACGGC TGATCGAAGA AGACCCAGGT
ACCGTGTCGG TACGTCGCCT TGAAGGGGCG CAGGCAACCC GTGACCAGGC CATCAGCCAG
GTGGCGGCAG CGCGCGCGGA AGTCGAACGG GCGCGGGAGC AGCAAGGCGG GGTGGAGGCG
GACAACGCGC AACTGCGCAG TGCGGCGGCC AATGTGGAAA AGGCCCGGCT GGACTTGGCC
CGCACCGTGG TGCGCGCCGA TGCCAATGGG CTGATCACTG ACCTGCGCAC TGACGTGGGC
CACTACGTTC CCGCCGGCAG CGCGATGATG ACCCTGATCG CCATCCACGA CGTGTGGATA
AGCGCCGACA TGACCGAGAA CAATCTCGGC CGTCTGCGCC CTGGTACACC GGTGCTGGTG
GTGCTGGACG CCATCCCCGG TAGGGTATTG CAAGGGCATA TCCGCAGCAT CGGCTATGGC
GTGAGCGTGG GGCAGGGCAC GCCGCCGGGT GCCTTGCCGA CCGTACAGAA CAGCCGCGAA
TGGCTACGCT CGGCGCAGCG TTTTCCGGTG ATCGTCGAGC TCGACCGAGA CCAACTTGCA
GACAGGTCCG GGCTGCGTGT GGGCGGTCAG GCCGAGGTCA TGGCCCTGCC CGGCGAAGGT
AACCCTCTGA GCCTTCTAGG GCGCGTGTTC ATGTGGCTGA TGAGCTGGCT GTCGTATGCC
TATTGA
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| Protein sequence | MSDAVDTPPD RAMHWVLVLI IVSLVWYLLA DRFTPYTQQA RLQAYVVPVA AEVAGQVKRV
AVGNNQQVRQ GDVLFELDQE QYRIALTRAQ ADLDTVRRQI GANTAGIDSA QAALVAAQAN
ERKARQDAER LKRLIEEDPG TVSVRRLEGA QATRDQAISQ VAAARAEVER AREQQGGVEA
DNAQLRSAAA NVEKARLDLA RTVVRADANG LITDLRTDVG HYVPAGSAMM TLIAIHDVWI
SADMTENNLG RLRPGTPVLV VLDAIPGRVL QGHIRSIGYG VSVGQGTPPG ALPTVQNSRE
WLRSAQRFPV IVELDRDQLA DRSGLRVGGQ AEVMALPGEG NPLSLLGRVF MWLMSWLSYA
Y
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