Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4459 |
Symbol | lolB |
ID | 6113429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4920729 |
End bp | 4921346 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641624254 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001751308 |
Protein GI | 170723620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.855114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTGC GCCATTGCAT CACCTTCACC CTGATCGCCC TGCTGGCCGG CTGTGCCGGC TTCGGTAGCC GCGAGGCCCT GCAGGGCCAC GGCGACCCAC AGCAGTGGCG CGCCCATAAA GAGCAACTGA GCAGCCTTGA CGGCTGGCAG ATCAACGGCA AGGTCGGCAT CCGCGCCCCG CGCGACTCCG GCAGTGGCAC GCTGTTCTGG TTGCAGCGCC AGGACTATTA CGACATCCGC CTGGCCGGCC CGCTGGGCCG AGGCGCTGCA CGCCTGACCG GCCGCCCCGG CGGTGTGGTA CTGGAAGTGG CCAATCAGGG CCGCTACGAA GCGGCCAGCC CAGAAGCGTT GCTGGAAGAA CAGCTGGGCT GGCAATTGCC GGTGTCGCAC CTGGTCTGGT GGGTGCGCGG CCTGCCTGCC CCCGACAGCA AGAGCAAGCT GACCCTCGAT GGCGACAGCC GCCTGGCCAG CCTCGACCAG GACGGCTGGC AGGTGCAGTA CCTGAGCTAC ACCGAACAGA ACGGCTACTG GCTGCCCGAG CGCCTGAAGC TGCACGGCAA GGACCTCGAC GTGACCCTGG TGGTCAAGGA CTGGCAGCCG CGCCAGCTGG GGCACTGA
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Protein sequence | MFLRHCITFT LIALLAGCAG FGSREALQGH GDPQQWRAHK EQLSSLDGWQ INGKVGIRAP RDSGSGTLFW LQRQDYYDIR LAGPLGRGAA RLTGRPGGVV LEVANQGRYE AASPEALLEE QLGWQLPVSH LVWWVRGLPA PDSKSKLTLD GDSRLASLDQ DGWQVQYLSY TEQNGYWLPE RLKLHGKDLD VTLVVKDWQP RQLGH
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