Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4457 |
Symbol | hemA |
ID | 6113427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4917537 |
End bp | 4918814 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624252 |
Product | glutamyl-tRNA reductase |
Protein accession | YP_001751306 |
Protein GI | 170723618 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTTTC TTGCACTTGG TATCAACCAT AAGACTGCCT CGGTAGACGT ACGCGAGCGC GTGGCGTTTA CCCCAGAGCA GCTGGTCGAC GCCCTGCAGC AGCTCTGCCG GCTGACTGCC AGCCGTGAAG CGGCGATCCT GTCGACCTGC AACCGCAGCG AGCTCTATAT AGAGCAGGAT CAGTTGTCCG CCGAGGCGGT CCTGCAGTGG CTGGCCGATT ATCACCGCCT GAGCCTGGAT GAACTGCGGG CCAGCGCCTA TATCCATGAA GAGCATGATG CCGTCAGGCA CATGATGCGG GTGGCCTCGG GCCTCGACTC GCTGGTGCTT GGCGAACCGC AGATCCTGGG CCAGATGAAG TCGGCCTATG CCGTGGCGCG CGAGGCTGGC ACCGTCGGCC CGCTGCTTGG GCGCCTGTTC CAGGCCACCT TCAGTGCGGC CAAACAGGTG CGTACCGACA CCGCGATCGG CGAGAACCCG GTGTCGGTGG CGTTTGCTGC GGTCAGCCTG GCGCGGCAGA TCTTCAGCGA CCTGGGCCGT AGCCAGGCGC TGCTGATCGG CGCCGGTGAA ACCATCACCC TGGTTGCCCG CCACCTGCAT GAGCAGGGCG TGCGCCGTAT CGTCGTGGCC AACCGGACAC TGGAGCGGGC CAGCCTGCTG GCCGAGCAGT TCGGTGCTCA CGCGGTGCTG CTGGCCGATA TCCCACAAGA GCTGGCGCAC AGCGACATCG TCATCAGCTC AACCGCCAGC CAGTTGCCCA TCCTGGGCAA GGGCGCGGTG GAAAGTGCGC TGAAGCAGCG CCGGCACAAG CCGATCTTCA TGGTCGACAT CGCCGTGCCG CGCGACATCG AGCCAGAGGT AGGTGAACTT GACGACGTGT ACCTGTATAC CGTCGATGAC CTGCACGAAG TGGTCGCGGA AAACCTCAAG AGCCGCCAGG GCGCAGCCCA GGCGGCCGAA GAGCTGGTCT CGGTGGGCGC AGAAGACTTC ATGGTGCGTC TGCGCGAACT GGCCGCGGTC GACGTGTTGC GCGCCTATCG CCAGCAAAGC GAGCGCCTGC GCGACGAAGA ACTGCAAAAG GCCCAGCGTC TGCTGGCCAA CGGTGGCAAC CCCGAGGACG TACTGGCGCA ACTGGCCCGG GGGCTGACCA ACAAACTCCT GCATGCGCCC AGCGTGCAGC TGAAAAAGCT CTCGGCCGAG GGCCGCCTCG ATGCGCTGGC CATGGCCCAG GAACTCTTTG CCCTCAACGA GGGCTCGACG GACAAATCCT TGCAATGA
|
Protein sequence | MAFLALGINH KTASVDVRER VAFTPEQLVD ALQQLCRLTA SREAAILSTC NRSELYIEQD QLSAEAVLQW LADYHRLSLD ELRASAYIHE EHDAVRHMMR VASGLDSLVL GEPQILGQMK SAYAVAREAG TVGPLLGRLF QATFSAAKQV RTDTAIGENP VSVAFAAVSL ARQIFSDLGR SQALLIGAGE TITLVARHLH EQGVRRIVVA NRTLERASLL AEQFGAHAVL LADIPQELAH SDIVISSTAS QLPILGKGAV ESALKQRRHK PIFMVDIAVP RDIEPEVGEL DDVYLYTVDD LHEVVAENLK SRQGAAQAAE ELVSVGAEDF MVRLRELAAV DVLRAYRQQS ERLRDEELQK AQRLLANGGN PEDVLAQLAR GLTNKLLHAP SVQLKKLSAE GRLDALAMAQ ELFALNEGST DKSLQ
|
| |