| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4402 |
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| Symbol | |
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| ID | 6113372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4861320 |
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| End bp | 4862096 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624197 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001751251 |
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| Protein GI | 170723563 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.922162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA TCGACACTCA CACCCACCTT GACTTCCCCG ACTTCGATGC CGACCGCACG
CGCCTGATGG CTAATGCGGC AGGGCGTGGG GTGGAGCGCA TGGTAGTGCT GGGGGTTTAT
CAGGCCAATT TCCAGCGGGT GTGGGACTTG GCCTGCAGCG ATGAGCGCGT GCGCGCAGCG
CTTGGGCTGC ATCCGATCTA CCTGGAGCAG CATCGCCCCG AGCACCTGGT GCAGTTGCGC
CAATGGCTTG AACGCCTGCA TGGCGATCCG CGGCTGTGCG CCGTGGGCGA GTTCGGCCTG
GACTACTACG TCGAAACGCT GGACAAGGCG CGCCAGCAAT CGCTGTTCGA AGGGCAATTG
CAGCTGGCCT GTGACTTCGA ACTGCCCGCC CTGCTCCACG TGCGCCGCAG CCATGCCCAG
GTGATTGCCA CACTCAAGCG CTACAAGCCG GCGCGGGCCG GGATCATCCA CGCGTTCGCG
GGCAGCTATG AAGAGGCGCG CGAATACATC AAGCTCGGTT TCCGGCTTGG GCTGGGTGGT
GCCGGTACCT GGCCTCAAGC AGTGCGTTTG CGCAAGACCC TGCCGCGCCT ACCGCTGGAA
AGCATCGTGC TGGAAACTGA CGCCCCGGAC ATGGCCCCGG CGATGTTTGC CGGTGAGCGA
AACAGCCCGG AGCATCTACC GGAGATTGCC GGGGCATTGG CTGAGGTGAT GGGCATTGAT
GTGCAAGTGT TGGCCGAGAC CAGCAGCAAG AATGCCTGTG AGCTGTTTGG CTGGTAG
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| Protein sequence | MRLIDTHTHL DFPDFDADRT RLMANAAGRG VERMVVLGVY QANFQRVWDL ACSDERVRAA
LGLHPIYLEQ HRPEHLVQLR QWLERLHGDP RLCAVGEFGL DYYVETLDKA RQQSLFEGQL
QLACDFELPA LLHVRRSHAQ VIATLKRYKP ARAGIIHAFA GSYEEAREYI KLGFRLGLGG
AGTWPQAVRL RKTLPRLPLE SIVLETDAPD MAPAMFAGER NSPEHLPEIA GALAEVMGID
VQVLAETSSK NACELFGW
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