Gene PputW619_4392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4392 
Symbol 
ID6113362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4848423 
End bp4849835 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID641624187 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001751241 
Protein GI170723553 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.823407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGA AAACCGTGCC GGTTAACTCC ATCGCACTGC GCCTGTCGGC GCTGTTCATT 
CTGGTGGCGA TGGGCGTGTT TCTGTTTATC GGCTCGGCAC TTTACCGCCA GGTCGACCAT
AGCCTGGACA TGCTGCCGGC GGCCGAGCTG GACGCCCGCT TCAGCGTGCT CGAATCCACC
CTCAATCGCT ACGGCAGCCC CGAGCACTGG GCCAAGATCC GCAACAAGCT CAACCTGCTC
AGCGAGGAAG ACAAACGTAT CCGCTTCTGG GTGGTCGGCA GCGACCCGGC GTTCGAATAT
GGCCACCCCA GCGAACGGGT CCGCGCATTT GCCGAAGGCC CTGAAGGGAT GCGCGACCTG
CGCCTGCCTG ACCGGCCCTA CCCTTACAAG GTGCTGGTCA GCGAGTTGCC GGCCCTGGGC
GCTCGCCCGC CACTGCGCTT TCTGATCGCT ATTGATACCG AGACCTTCTG GCAGGCTCAG
CACAGCCTGC TGGTGGCCAT CGTCGGGCTG GCGGTGCTCG GTGTGCTGCT GGCCTCGGTG
CTCGGCTACT GGGTGGCGCG CATTGGCCTG CGCCCGCTGC TGGCGCTGTC CAACGAGGCA
CAGGCCTTGG CCCCCCCACG CCTGGATGGC CGCCTGCAAA CCGTCAACCT GGCCCCGGAA
CTGGCGCAAT TCGCCGGCGC TTTCAACGCG GCGCTCGACC GGGTCAGCCA GGCCTATTCG
CAGCTGGAAG CGTTCAACGC CGACGTTGCC CACGAACTGC GCTCGCCGCT GACCAACCTG
ATAGGCCAGA CCCAGGTCGC CCTCACCCGG GGGCGCAGCG CCGAACACTA CTTCGAAGTG
CTGCAATCAA ACCTGGAAGA GCTCGAACGC CTGCGCAGCA TCATCAACGA CATGCTGTTC
CTGGCCAGCG CCGACCAGGG CAGCAAGGCC ACTGCCCTGA CCCAGGTATC GCTGGCCGAG
GAAGTGGCCA CCACCCTCGA TTACCTCGAC TACATCCTCG AAGACGCCCA GGTCAGCGTC
ACTGTCAGCG GCGATGCCCA GGCCCCCATC GAAAAAGCCC AGTTGCGCCG GGCGTTGATC
AACCTGCTGA ACAATGCCGT GCAGCATACC GCACCGCACC AAGTGATCCG CGTGCATATC
GATGCCGGGC CGGAGCAGGT CAGCATTGCC GTGAGCAACC CAGGGCCGGC TATCGACGAT
GATCACCTGC CTCTGCTGTT CGAGCGGTTC TACCGGGTGG ATGCGGCGCG CAGCAACAGT
GGCGGGGGCA ATCACGGGTT GGGGTTGGCC ATCGTCAAGG CGATTGCGCT GATGCATGGG
GGTGAGGTTT TTGTGCGCAG CGAGGCGGGT GCCAACACCT TCGGCATTCG CCTGCCAAAC
GCTCAACTGC AGGGGTTTGC GGCAAAGATC TAA
 
Protein sequence
MSWKTVPVNS IALRLSALFI LVAMGVFLFI GSALYRQVDH SLDMLPAAEL DARFSVLEST 
LNRYGSPEHW AKIRNKLNLL SEEDKRIRFW VVGSDPAFEY GHPSERVRAF AEGPEGMRDL
RLPDRPYPYK VLVSELPALG ARPPLRFLIA IDTETFWQAQ HSLLVAIVGL AVLGVLLASV
LGYWVARIGL RPLLALSNEA QALAPPRLDG RLQTVNLAPE LAQFAGAFNA ALDRVSQAYS
QLEAFNADVA HELRSPLTNL IGQTQVALTR GRSAEHYFEV LQSNLEELER LRSIINDMLF
LASADQGSKA TALTQVSLAE EVATTLDYLD YILEDAQVSV TVSGDAQAPI EKAQLRRALI
NLLNNAVQHT APHQVIRVHI DAGPEQVSIA VSNPGPAIDD DHLPLLFERF YRVDAARSNS
GGGNHGLGLA IVKAIALMHG GEVFVRSEAG ANTFGIRLPN AQLQGFAAKI