| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4389 |
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| Symbol | |
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| ID | 6113359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4843512 |
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| End bp | 4844675 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641624184 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001751238 |
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| Protein GI | 170723550 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0818366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTC CTACCCGCCC TCTCCTGCTG GCCGCCACCG CCCTGCTCGC CCTCGCAGCA
CTTGGCATCT GGTATGGCCA GCGCCAGGAG GCGCCGGTTG CGCGCGCCCA AAGCGCCATT
CCGGTGCGCG TGGTCAGCGT CGCCCAGCAG GACGTGCCGC GCTACGCCAG CGCCATCGGC
TCCGTGCTGT CGCTGCACAG CGTCGAAATA AAACCGCAGG TCGAAGGGGT GCTGACCCGG
GTACTGGTCA AAGAGGGCCA GTGGGTCAAG CAAGGCGACC TGCTGGCCAC CCTGGACGAT
CGCAGCATCC GCGCCAGCCT CGACCAGGCC CGCGCCCAGC TCGGCCAGAG CCAGGCTCAA
ATCCAGGTGG CCGGCGTCGA CCTCAAGCGC TACCGCCTGC TCAGCAGCGA TGACGGCGTG
TCCAAGCAGA CCCTCGACCA GCAACAGGCG CTGGTCAATC AGCTGCAAGC CACCGTAAAA
GGCAACCAGG CCGCCATCGC CAATGCCGAA GTCCAGCTCT CCTACACGCA GATTCGCTCC
CCTGTCACCG GGCGTGTCGG CATCCGCAAC ATCGACCCCG GCAACCTGGT GCGCGCCAGC
GATACCCAGG GCCTGTTCAG CGTGACCCAG ATCGACCCCA TCGCGGTCGA GTTCTCCCTG
CCGCAACAGA TGCTGCCAAC CCTGCAGGGC CTGCTGAAGG CGCCCACGCC CGCATTGGTG
CAGGCCTACA TGGACGCCGA TGGCGAAAGC AACCTGCTGG GTGAAGGCCA CCTGGCCCTG
ATCGACAACC AGATTTCGGC CAACACCGGC ACGGTGCGGG TCAAGGCCGA GTTCGACAAC
AAGGACGGCC GGCTGTGGCC GGGGCAACTG GTGACCATCC GTTTGCGCAC TGCCGTGGAA
GAAAACGCCC TGGTGGTGCC GCCGCCAGTG GTGCAGCGCG GCGTCGACGG CCACTTCGTC
TACCGCCTGG ACGGCGACAA GGTCACCAGT GTGCCGGTCA AGGTGCTGTA CCAGGACAGT
GGCCTGAACA TCATTGCCGG GGTCAAGCCG GGCGAGCGTG TGGTGCTCGA TGGTCAGTCG
CGGCTCAAGC CGGGCTCTCG CGTGGAGGTC ACCCCGGACG CACCGCCGCC GTCGGAAATG
GCCGACCGCC GGAGCCAGCC ATGA
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| Protein sequence | MRRPTRPLLL AATALLALAA LGIWYGQRQE APVARAQSAI PVRVVSVAQQ DVPRYASAIG
SVLSLHSVEI KPQVEGVLTR VLVKEGQWVK QGDLLATLDD RSIRASLDQA RAQLGQSQAQ
IQVAGVDLKR YRLLSSDDGV SKQTLDQQQA LVNQLQATVK GNQAAIANAE VQLSYTQIRS
PVTGRVGIRN IDPGNLVRAS DTQGLFSVTQ IDPIAVEFSL PQQMLPTLQG LLKAPTPALV
QAYMDADGES NLLGEGHLAL IDNQISANTG TVRVKAEFDN KDGRLWPGQL VTIRLRTAVE
ENALVVPPPV VQRGVDGHFV YRLDGDKVTS VPVKVLYQDS GLNIIAGVKP GERVVLDGQS
RLKPGSRVEV TPDAPPPSEM ADRRSQP
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