| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4384 |
|---|
| Symbol | |
|---|
| ID | 6113354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4840382 |
|---|
| End bp | 4841281 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641624179 |
|---|
| Product | response regulator receiver modulated CheW protein |
|---|
| Protein accession | YP_001751233 |
|---|
| Protein GI | 170723545 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.234409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGC AAAATGCCCG CGCGGACGCG TTGTCCCTGC TGCTGTTCAC CCTGCGCAGC
GGCAAGCTGA TGGCAATCAA CCTGCTCAAG GTCAGCGAGA TCATCCCTTG CCCGTCGCTG
ACCAGGTTGC CCGAATCGCA CCCCCACGTG AAAGGCGTGG CGACGCTGCG CGGCAACCCG
CTGTCGGTGA TCGACCTGTC GCGGGCCATC GGTGAACGCC CGCTGGCCGA CCCGGACGGT
GGCTGCCTGA TCGTCACCGA GATCAGCCGC TCGCGCCAGG GCCTGCATGT GCAGGCAGTG
AGCCGCATCA TCCACTGCCT GAGCACCGAC ATCAAGCCGC CGCCCTTTGG CTCGGGCAAC
CGCTCGTTCA TCACCGGCGT GACCCGTGTC GACAATACCT TGGTGCAGGT GCTGGACATC
GAAAAGGTGA TCCATGCCAT CGCCCCGCCG GAGCCGGAGC CCGCTCCGGG CAAGCTGAAC
GAAGAAGACG CCAGCCTGTT GGCCGCCGCC AACATCCTGG TGGTGGACGA CAGCCAGGTG
GCGCTGCAAC AGTCGGTGCA CACCCTGCGT AACCTGGGCA TCGACTGCCA CACCGCACGC
AGCGCCAAGG ATGCAATCAA CGTGCTGCTG GAGCTGCAGG GCACCGCGCA GGAGATCAAC
ATCATCGTGT CCGACATCGA GATGTCGGAG ATGGACGGCT ATGCCTTCAC CCGCACCCTG
CGCGAAACAC CGGACTTCCA GCACCTCTAC GTGCTGCTGC ACACCTCGCT GGACAGCGCG
ATGAGTGCCG AGAAGGCCAG GTTGGCGGGG GCCAATGCCA TCCTGACCAA GTTCTCCTCA
CCGGAGCTGA CCGATTGCCT GGTGGTGGCG GCACGCACGG TAGTGTTTGC CGAGCGATGA
|
|---|
| Protein sequence | MATQNARADA LSLLLFTLRS GKLMAINLLK VSEIIPCPSL TRLPESHPHV KGVATLRGNP
LSVIDLSRAI GERPLADPDG GCLIVTEISR SRQGLHVQAV SRIIHCLSTD IKPPPFGSGN
RSFITGVTRV DNTLVQVLDI EKVIHAIAPP EPEPAPGKLN EEDASLLAAA NILVVDDSQV
ALQQSVHTLR NLGIDCHTAR SAKDAINVLL ELQGTAQEIN IIVSDIEMSE MDGYAFTRTL
RETPDFQHLY VLLHTSLDSA MSAEKARLAG ANAILTKFSS PELTDCLVVA ARTVVFAER
|
|---|
| |