| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4381 |
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| Symbol | |
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| ID | 6113351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4835419 |
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| End bp | 4836852 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641624176 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001751230 |
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| Protein GI | 170723542 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.108825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.496475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGAA GCAGTCCGCT GTCACCGCTG TTGCCGGGAG CCGTCGCGCT CCTGGTACTG
ATTTCAAACC CGGTTGCCCA GGCAGCCGAT GACATAGACC CCTCGCTGCG CTCCATCGGG
CCGTCACTGC TACGCGATGC CCCCGATGCC ATCCCTGCCC GCCCACCGGC AGGCCAGGCC
GCCAACAATG GCGATCGCCT CGGCCTGGCC GAGGCGGTGC TGGCCGCTGC GCAGTGGCAC
CCCAGCATCG CTGAAGCCAT CGGCAACCTG TACAAGCAAG GCGAAGGCAT CAACGTGGCC
CGCGCCGGTT ACTACCCACA GGTTTCCGGC GGTATCCGCA CCGGCTATGA CAGCGGGTAT
GGCGGCGACC GCAGCAGCCA GGCGCTGAAC CTGTCGCTCA AGCAGATGCT CTACGATTTC
GGCAAGGTCG ACAGTGCTGT CGACGCGGCT CACGCTGCCG CCGCCCGCGC CCAGGCCAAC
ATCCTGCTGG TGGTAGACGA CCTGGCCCGC GATACCGCCT ACGCCTGGAT CGAAACCCGC
CGTTACGAGC AGCTCATGGT GATTGCTCGC GAGCAGATCA AAGGCGTTGG CGATATTGCC
GGCATGGCGC GCCAGCGCAG CGACATGGGC GCCAGCACGC GCTCCGACGT GGTCCAGGCC
GAGTCCCGGG TGGAAGGCGC CCGTGCCACC CTCGAGGAGT ATCAGGCCCA GTACGAGCGG
TGGCGCTCGA CCCTCGCCGC CCTGCTCGGC CGCGTCGCAC CGCCGGCCCT GGCCGAAGAA
ACGCCCCCCG AACTCAACCA GGCCTGCAAG CGCCCACCGC AAGCCGACGA CCGCCTGCCT
GCAGTGCTCA TGGCCCTGGC CCTGCGCGCG CAATCCAAAG CCGAACTGGC ACAGGCCAAG
GCCGAGGCCT ACCCGACACT GTCGCTGCAG CCGCAGGTCA ACCACTACCT GGACAACGAC
TACGACCGCG ACAACAACCG CCTCGACCGT ACCCAGGCGG GCATTTACCT GAACCTCGAA
GTGCCGATCT ACCAAGGCGG CGCCATCAGC GCCCGCAGCC GCGCGGCCGG ACATGCCCTG
ACCGCCGCCG ATTCCGCCGA AGACGCCGCA CGCCTGCAGG CCCGCCGAGG GCTGGCCGAA
GCCATGGCGC AAACCTCGGG GCTGGGCCGC CGGCTGAGTT CGCTGGAGGC GCGCCAGGCC
AGCATCAAGG AAGCACGCAT GCTCTACGGC CGGCAATACC TGGACCTGGG CACGCGCCCG
CTGCTCGACC TGCTCAATGC CGAGCAGGAA ATCTACCAGT CGCGCTTCGA ACTTGCCGGC
ACCCGTTCCG ACCTGCTGCG CCTGGATGTC GACTGCCTGT ACAACACCGG CGCCCTGCGC
ATGGCCTTAG GCCTTGAAGG GCGCAACCTG CAAGGGGTGG AGATCGAGCC ATGA
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| Protein sequence | MKRSSPLSPL LPGAVALLVL ISNPVAQAAD DIDPSLRSIG PSLLRDAPDA IPARPPAGQA
ANNGDRLGLA EAVLAAAQWH PSIAEAIGNL YKQGEGINVA RAGYYPQVSG GIRTGYDSGY
GGDRSSQALN LSLKQMLYDF GKVDSAVDAA HAAAARAQAN ILLVVDDLAR DTAYAWIETR
RYEQLMVIAR EQIKGVGDIA GMARQRSDMG ASTRSDVVQA ESRVEGARAT LEEYQAQYER
WRSTLAALLG RVAPPALAEE TPPELNQACK RPPQADDRLP AVLMALALRA QSKAELAQAK
AEAYPTLSLQ PQVNHYLDND YDRDNNRLDR TQAGIYLNLE VPIYQGGAIS ARSRAAGHAL
TAADSAEDAA RLQARRGLAE AMAQTSGLGR RLSSLEARQA SIKEARMLYG RQYLDLGTRP
LLDLLNAEQE IYQSRFELAG TRSDLLRLDV DCLYNTGALR MALGLEGRNL QGVEIEP
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