Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4371 |
Symbol | |
ID | 6113341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4812802 |
End bp | 4814010 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624166 |
Product | aminotransferase |
Protein accession | YP_001751220 |
Protein GI | 170723532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAACC CTGGTTCGCC GCGCCGCTTT GCGCGCATCG ATCGTCTCCC CCCATACGTC TTCAACATCA CTGCCGAGCT CAAGATGGCC GCCCGCCGCC GTGGCGAGGA CATCATCGAC CTGAGCATGG GTAACCCCGA TGGCGCTACC CCGCCGCACA TCGTCGAGAA GCTGGTGCAG GTTGCCCAGC GTGAAGACAC CCACGGCTAT TCCACCTCTC GCGGCATCCC GCGCCTGCGC CGGGCCATTT CCAACTGGTA CAAGCAGCGC TACGAGGTCG ACATCGACCC GGAAAGCGAA GCCATCGTAA CCATTGGCTC GAAGGAAGGC CTGGCCCACT TGATGCTGGC CACGCTCGAC CAGGGCGACA CCGTGCTGGT GCCCAACCCG AGCTACCCGA TCCACATCTA CGGCGCAGTG ATCGCCGGTG CCCAGGTGCG TTCGGTGCCG CTGGTGCCCG GTGTGGACTT CTTCAACGAG CTCGAGCGCG CGATCCGCGA GTCCATCCCC AAGCCTAAGA TGATGATCCT CGGCTTTCCG TCCAACCCCA CTGCCCAATG CGTGGAGCTG GACTTCTTCG AGCGCGTGGT GGCCTTGGCC AAGCAGTATG ACGTGCTGGT GGTGCACGAC CTGGCCTACG CCGATATCGT CTACGACGGC TGGAAGGCAC CGTCGATCAT GCAGGTGCCG GGTGCCAAGG ACATTGCCGT GGAGTTTTTC ACGCTGTCCA AGAGCTACAA CATGGCCGGC TGGCGGATCG GCTTCATGGT CGGCAACCCT GAGCTGGTCA GCGCCCTGGC GCGAATCAAG AGCTACCACG ACTACGGCAC GTTCACGCCC TTGCAGGTCG CGGCAATCGC GGCGCTCGAA GGTGACCAGC AGTGTGTGCG CGACATCGCC GAGCAGTACC GCCAGCGCCG CAACCTGTTG GTCAAAGGCC TGCATGAGCT GGGCTGGATG GTCGAAAACC CCAAGGCGTC GATGTATGTA TGGGCCAAGA TACCCGAGCA GTACGCCCAC CTGGGGTCGT TGGAATTTGC CAAGAAGCTG CTGGCTGAAG CCAAGGTGTG TGTCTCGCCG GGCATCGGTT TTGGCGATTA CGGTGATGAC CACGTGCGCT TCGCCCTGAT CGAAAACCAG GACCGGATTC GCCAGGCGAT ACGGGGCATC CGGCAGATGT TCCGGGCTGA TGGCCTGAGC CGCAAATAG
|
Protein sequence | MANPGSPRRF ARIDRLPPYV FNITAELKMA ARRRGEDIID LSMGNPDGAT PPHIVEKLVQ VAQREDTHGY STSRGIPRLR RAISNWYKQR YEVDIDPESE AIVTIGSKEG LAHLMLATLD QGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVPGVDFFNE LERAIRESIP KPKMMILGFP SNPTAQCVEL DFFERVVALA KQYDVLVVHD LAYADIVYDG WKAPSIMQVP GAKDIAVEFF TLSKSYNMAG WRIGFMVGNP ELVSALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA EQYRQRRNLL VKGLHELGWM VENPKASMYV WAKIPEQYAH LGSLEFAKKL LAEAKVCVSP GIGFGDYGDD HVRFALIENQ DRIRQAIRGI RQMFRADGLS RK
|
| |