Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4332 |
Symbol | hscA |
ID | 6113301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4776710 |
End bp | 4778572 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624126 |
Product | chaperone protein HscA |
Protein accession | YP_001751181 |
Protein GI | 170723493 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000000366602 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCCTAC TGCAGATCGC CGAACCCGGT CAAACCCCCC AGCCGCACCA GCGTCGCCTG GCGGTGGGCA TTGACCTGGG TACTACCAAT TCTCTGGTCG CTGCCCTGCG CAGCGGTCGC AGTGAACCCC TGCCCGATGC GCAGGGCAAC GTCATTCTGC CCTCCGCGGT GCGCTATCTG GCTGGCCACA ATGAGGTCGG CCTGGCAGCG CGTGAAGCTG CCGCCAGCGA CCCGCTGAAC ACCGTGCTGT CGGTCAAGCG CCTGATGGGA CGTGGCCTGG CCGACGTCAA GCAACTGGGT GAACAGCTGC CGTATCGCTT CATTGGCGGC GAGTCGCACA TGCCGTTCAT CGACACTGTC CAAGGGCCGA AGAGCCCGGT GGAAGTGTCC GCTGATATCC TCAAGGTGCT GCGCGAGCGC GCCGAAGCGA CCTTGGGTGG CGAGCTGGTG GGTGCGGTGA TCACCGTGCC GGCTTATTTC GACGATGCCC AGCGTCAGGC GACCAAGGAC GCAGCCAAAC TGGCTGGCCT GAATGTACTG CGCCTGCTCA ATGAGCCGAC CGCTGCTGCA GTGGCCTATG GCCTGGATCA GAATGCCGAA GGCCTGGTGG CCATCTATGA CCTGGGCGGC GGTACGTTCG ATATTTCTAT CCTGCGCCTG ACTGCAGGCG TGTTCGAGGT ACTCGCCACT GGTGGTGACA CCGCCCTGGG GGGCGATGAC TTCGATCACG CCATTGCCAG CTGGATCATA GAGCAGGCCG GCCTGTCCGC CGACCTCGAT CCTGCTACCC AGCGCCAGCT GCTCCAGGCC GCCTGCGCCG CCAAGGAAGC CCTGACCGAC ACCGACGTGG TCAGTGTCAG CCATGGCGCC TGGCAGGGCG AGCTCAGCCG CGCCGCTTTC GAAGCCATGA TCGAGCCTCT GATTGCCCGT AGCCTCAAGG CCTGCCGTCG TGCCGTGCGC GACAGTGGCG TCGAGCTGGA TGAAGTGGGG GCGGTGGTCA TGGTGGGTGG TTCGACCCGC GTACCGCGTG TGCGTGAAGC AGTAGGTACG CTGTTCGGCC GTACCCCGCT GACCTCGATC GACCCCGACC AGGTGGTGGC CATCGGCGCC GCCATTCAGG CTGACACCCT GGCCGGCAAC CGCCGCGAAG GCGGTGAGCT GCTCCTGCTC GACGTCATTC CGCTGTCCCT TGGTCTTGAG ACCATGGGAG GGTTGATGGA AAAGGTGATC CCGCGCAACA CCACCATTCC GGTGGCCCGC GCGCAGGAGT TCACCACGTA TAAAGATGGC CAGTCGGCCA TGATGATTCA CGTTCTGCAG GGTGAGCGCG AGCTGATCAG CGACTGCCGT TCGCTGGCGC GTTTCGAGCT GCGTGGTATT CCGGCCATGG TTGCCGGCGC CGCGAAAATC CGCGTGACCT TCCAGGTCGA TGCCGACGGT TTGCTCAGCG TCGCGGCCCG TGAGCTGGGT TCCGGTGTAG AAGCCAGTAT CCAGGTCAAG CCGTCCTACG GTCTGACTGA CGGCGAGATC GCACGCATGC TCAAGGACTC CTTCGAGCAC GCAGGCTCCG ACAAGCAGGC GCGTCAGCTT CGTGAGCACC AGGTCGACGG CGAGCGCCTG CTTGAAGCTG TCCAGGGTGC CCTGGATGCT GATGGCGAGC GACTGCTCAG CACTGAAGAG CGCGAAGCCA TCGAATTCCA GATGCAAGAA CTACGTGATT TGCTGGCCGG CACCGATGGC CCTGCCATCG AGCAACAGAC CAAGCGTCTG TCGCAGGTGA CCGATGCATT TGCCGCCCGT CGCCTTGATT CGACGGTCAA AGCCGCACTG GCCGGGCGCA ACCTGAATGA GATCGAGGAG TAA
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Protein sequence | MALLQIAEPG QTPQPHQRRL AVGIDLGTTN SLVAALRSGR SEPLPDAQGN VILPSAVRYL AGHNEVGLAA REAAASDPLN TVLSVKRLMG RGLADVKQLG EQLPYRFIGG ESHMPFIDTV QGPKSPVEVS ADILKVLRER AEATLGGELV GAVITVPAYF DDAQRQATKD AAKLAGLNVL RLLNEPTAAA VAYGLDQNAE GLVAIYDLGG GTFDISILRL TAGVFEVLAT GGDTALGGDD FDHAIASWII EQAGLSADLD PATQRQLLQA ACAAKEALTD TDVVSVSHGA WQGELSRAAF EAMIEPLIAR SLKACRRAVR DSGVELDEVG AVVMVGGSTR VPRVREAVGT LFGRTPLTSI DPDQVVAIGA AIQADTLAGN RREGGELLLL DVIPLSLGLE TMGGLMEKVI PRNTTIPVAR AQEFTTYKDG QSAMMIHVLQ GERELISDCR SLARFELRGI PAMVAGAAKI RVTFQVDADG LLSVAARELG SGVEASIQVK PSYGLTDGEI ARMLKDSFEH AGSDKQARQL REHQVDGERL LEAVQGALDA DGERLLSTEE REAIEFQMQE LRDLLAGTDG PAIEQQTKRL SQVTDAFAAR RLDSTVKAAL AGRNLNEIEE
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