Gene PputW619_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4328 
Symbol 
ID6113297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4774465 
End bp4775610 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content59% 
IMG OID641624122 
Productradical SAM protein 
Protein accessionYP_001751177 
Protein GI170723489 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000214748 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACAT CTACTGGCAA AATCAACCTG TTGGGCCTGA CCCAGCCGGA AATGGAACAA 
TTCTTCGACT CTATTGGGGA GAAGCGCTTC CGTGCCGGCC AGGTGATGAA ATGGATTCAC
CATTTTGGCG TCGATGATTT CGCCGCCATG ACGAACGTCG GCAAGGCCTT GCGCGAAAAG
CTCGAGGCTG TTGCCGAAAT TCGCCCACCG GAAGTGGTCA GTGAGGACAT TTCCGCAGAC
GGCACCCGCA AATGGGTGAT CCGCGTTGCC TCCGGCAGCT GCGTCGAGAC CGTCTACATC
CCAACCGACG ATCGCGGTAC TCTGTGCGTT TCGTCGCAAG CCGGCTGCGC CCTGGACTGC
AGTTTCTGCT CCACCGGCAA GCAAGGCTTC AACAGCAACC TCACCGCCGC CGAAGTGATC
GGCCAGGTGT GGCTTGCCAA CAAATCCTTC GGGACCGTCC CGGCCAAGAT CGACCGCGCG
ATTACCAACG TGGTCATGAT GGGCATGGGC GAGCCTCTGC TGAATTTCGA CAATGTCATC
GCTGCCATGA AGATCATGAT GGATGATCTG GGCTATGGCA TTTCCAAACG TCGCGTCACC
TTGTCCACCT CCGGTGTGGT ACCGATGATC GACGAACTGG CCAAGCACAT CGACGTGTCC
CTGGCCCTGT CGCTGCATGC GCCGAATGAC GAACTGCGCA ACCAGCTGGT GCCGATCAAC
AAGAAGTACC CGCTGAAGAT GTTGCTGGAG TCGTGCATGG GCTACATGGC CACCTTGGGT
GGCAAGCGCG TGCTGACGGT CGAGTACACC CTGCTCAAGG ACGTCAACGA CCAGCCCGAG
CATGCCGCGC AGATGATCGA ACTGCTGCGC GATGTACCGT GCAAGATCAA CCTGATCCCG
TTCAACCCGT TCCCGCATTC CGGTTACGAG CGCCCTAGCA ACAACGCTAT TCGCCGCTTC
CAGGACTTGC TGCATCACGG TGGTTTCAAC GTCACCACCC GTACCACCCG TGGCGATGAC
ATCGATGCCG CCTGTGGCCA GCTGGTCGGC CAGGTCAATG ACCGTACCCG CCGCAGCGAG
CGCTATATCG CCGTACGTCA GCTGTCTGCC GACGCCGAGC TGCAAGACAG CGCCGTGCGC
CACTGA
 
Protein sequence
MTTSTGKINL LGLTQPEMEQ FFDSIGEKRF RAGQVMKWIH HFGVDDFAAM TNVGKALREK 
LEAVAEIRPP EVVSEDISAD GTRKWVIRVA SGSCVETVYI PTDDRGTLCV SSQAGCALDC
SFCSTGKQGF NSNLTAAEVI GQVWLANKSF GTVPAKIDRA ITNVVMMGMG EPLLNFDNVI
AAMKIMMDDL GYGISKRRVT LSTSGVVPMI DELAKHIDVS LALSLHAPND ELRNQLVPIN
KKYPLKMLLE SCMGYMATLG GKRVLTVEYT LLKDVNDQPE HAAQMIELLR DVPCKINLIP
FNPFPHSGYE RPSNNAIRRF QDLLHHGGFN VTTRTTRGDD IDAACGQLVG QVNDRTRRSE
RYIAVRQLSA DAELQDSAVR H