| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4327 |
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| Symbol | |
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| ID | 6113296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4773690 |
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| End bp | 4774451 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624121 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_001751176 |
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| Protein GI | 170723488 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.813272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000191123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGC GCGCCGCGCT GTCGATCCTT GCGCTTTCGC TGCTGGCCGG CTGCGTGTCG
GGTGGCGCGA GCGACCCTCT TGCCACTCAT CAGGGGCGCG TGGAGGCGGG GCGTGCTTAC
GTGCAGCTTG GGCTTGGCTA TTTGCAACAA GGTTTGACCG AGCAGGCCAA GGCTCCGTTG
GGCAAGGCAC TGGTACTCGA TGCCAAGGAT GCCGATGCCC ACGCAGCCTT GGCCCTGGTG
TTTCAGGCCG AAGGTGAAGC TGCGCTGGCT GAGGAACACT TCAAGAAAGC GTTGTCGGCA
AGCCCCGGTG ACACGCGAAT TCGCAACAAT TACGGCAGTT TCCTATATGC TCAGCAGCGT
TTCGCCGAAG CCGAGCAGAT GTTTCGCCTG GCCAGCGCCG ATACCCTGTA TCCTGAACGT
TCGCGCGTCT ACGAGAACCT TGGCCTGACA GCCCTGGAAC TCGGCAACCG TGACCAGGCG
CAGGCGTATC TGAGCAAGGC CCTGCAACTC AACCAGCGGC AACCCAGGGC GTTGCTGGAA
ATGGCTGAGT TGTCCTACGA AAACAGGCAT TATGTGCCGG CACGGGGTTT CTACGATCGT
TTCAGCCAGT TGAGCGATCA CAATGCCCGT AGCCTCCTGC TGGGCAGCCG CCTTGCCCGG
GTGTTCGACG AGCAGGGCAC ACAGGCCGAA CTGGGCCAGC AATTACAACG ACTTTATCCC
GGTACGCCGG AATATCAGCA ATACCTGTCG GAGCAACGAT GA
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| Protein sequence | MSLRAALSIL ALSLLAGCVS GGASDPLATH QGRVEAGRAY VQLGLGYLQQ GLTEQAKAPL
GKALVLDAKD ADAHAALALV FQAEGEAALA EEHFKKALSA SPGDTRIRNN YGSFLYAQQR
FAEAEQMFRL ASADTLYPER SRVYENLGLT ALELGNRDQA QAYLSKALQL NQRQPRALLE
MAELSYENRH YVPARGFYDR FSQLSDHNAR SLLLGSRLAR VFDEQGTQAE LGQQLQRLYP
GTPEYQQYLS EQR
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