| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4317 |
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| Symbol | |
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| ID | 6113286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4759678 |
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| End bp | 4761960 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624111 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001751166 |
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| Protein GI | 170723478 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00531839 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCAAT ACGTGCCATC TGCAGTGAGC TCTCCACGCC TGATCGTGTC TGCCATCGGC
GTCGCTCTGA GCGCTTCGTC CGTCTACGCC GCCGATCCGG CTACCAGCAG CGCCATCACC
CTGGATGCCA CCAGCGTCAA TGGCAAGGCT GAACAGGCCA GCACCGATTA CAAGGTCGAA
AAGGCCTCCT CGCAGAAGTA CACCGCGCCG TTGGTGGACA CCCCACGCTC GGTTACCGTA
ATACCCCAGC AAGTCATCAA GGACACCAAC GCCCTGAGCC TGCAGGATGC CCTGCGCACT
GTGCCAGGCA TCACCTTTGG CGCAGGCGAA GGCGGCAACC CGCAAGGCGA CCGCCCGTTC
ATTCGTGGTT TTGACGCCCA GGGTGACACC TACCTGGACG GTGTACGTGA TACCGGTGCG
CAGACCCGTG AAATCTTCGC CATCGAATCG GTGGAAGTGG CCAAAGGCCC CAACTCGGCC
ATCGGTGGCC GCGGCGCGGC AGGCGGCACC ATCAACCTGG TGAGCAAGCG TGCACACCTG
GGCAACTCGC TGGACGGTGC CTGGACCTGG GGCAGCGACC AGACCCAGCG CTACACCTTT
GACGGCAACT ACCAGTTCAG CGACACCGCT GCCGGCCGTC TCAACCTGAT GACCCATGAG
AGCAACGTTG CCGGCCGGGA CAAGGTCAAC TATGACCGCT GGGGTATCGC CCCATCCCTG
GCCTTCGGCC TGGGCACGCC AACCCGCGTC AACCTTGACT ACTACCACCT GGAAAGCGAC
GACCTGCCGG ATTCGGGCAT CCCGTACAGC ATCCCTACCG GTGGCAGCAG CGCGCGCACC
TCGGCGCACC CAAGCAAGCC GATCGACGGC GGCGACAGCG ACAACTTCTA CGGCCTGACC
GGTCGCGACT TCCGCAAGAC CCGTGTGGAC ATCGCTACTA TCGCCGTGGA ACACGACCTG
AGCGACTCGT TGACCATCAA GAACACCCTG CGTCATGGCA ACAGCATGCA GGACTACATC
CTGACCCAGC CGGACGACAG CGCGGGCAAC GTGAACAACA ACGGCGTATG GCGTCGTGCC
AATACCCGTG TGGGCAACAC TGCCACCACC ACCAACCAGA CCGACCTGTT CGGTGAGTTC
TTCGTGGGCG GTTTCAAGAA CAGCTTCTCC ACCGGGGTCG AGTTCAGCAA GGAAGACTCG
GACCGCCAGA GCTACACGGT GTCGCCAAAC AGCAAGCTCA CCTGCACCGG CCCGGGCAAT
GGTGGCAGCT GTACTTCGCT GAGCGACCCG AACCCCGACG ATGCCTGGGA TGGCACGATC
TCGCGCAACT ACGCTGGCAC AAAGACCAGC AGCAAGACCC GCGCAATCTA CGCCTTCGAC
ACTCTGGAGC TGACGCCTGA GTGGCTGCTG AACATGGGCC TGCGTTATGA CCACTTCGAT
ACCAAGTTCC GCACTTACGA TGCCTCGGGC GCGACCGTGG TGAACAAGAA CGGCGTCCCG
ACCAAAGGCC GCGACACCAG CGAGTTCTTC ACCGGCCAAT TGGGCCTGGT CTGGAAACCG
GCCGAGAACG GTAGCATCTA CGTGTCCTAT GCCACTTCCG CCACCCCGCC CGGGGCGATG
CTCGGCGAAG GTACCGAAGG CAACCCGCTG TCGGGCACCA CCGACCGTGG TGGCAACATC
CTGGCCAGCG ACATGGAGCC GGAAGAAACC ACCAACTACG AAATCGGCAC CAAGTGGGAC
CTGCTCGACG AGCGCCTGTC CCTGGCCGCC GCGCTGTTCC GCACCGAAAA GGAAAACGCC
CGTGTGCAGG TGGACACCAC CACCTACGAA AACGTCGGCG AAACCCGCGT GCAAGGCATC
GAGCTGTCGG CCAGCGGCAA GCTCACCGAC AAGTGGCAGG TGTTCGCCGG CTACACCTAC
CTGCAAGCCC GCCAGATCGA CGGCGGCCCG TTGGGCAAGG CCAACGACGG CAACCAGTTG
CCGAACACGC CGAACAACAG CGCCAGCCTG TGGACCACGT ACTCGATCAC CCCGAAGCTG
ACGGTCGGCG GTGGCGCCTT CTATGTGGAT GACGTCTACG GCAACGTGGC CAACACCACC
ATGGTCGACA GCTATGTACG TTACGACGCC ATGGCCGCCT ACAAGCTGAC CAAGAACGTC
GACCTGCAAC TGAATGTGCA GAACCTCACC AACGAGGTGT ATTACGACAA GGCGTTTTCC
ACCCACTTCG CCAACCAGGC GGCGGGCAGG ACTGCATTGC TGACCACCAG CGTCCACTTC
TAA
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| Protein sequence | MRQYVPSAVS SPRLIVSAIG VALSASSVYA ADPATSSAIT LDATSVNGKA EQASTDYKVE
KASSQKYTAP LVDTPRSVTV IPQQVIKDTN ALSLQDALRT VPGITFGAGE GGNPQGDRPF
IRGFDAQGDT YLDGVRDTGA QTREIFAIES VEVAKGPNSA IGGRGAAGGT INLVSKRAHL
GNSLDGAWTW GSDQTQRYTF DGNYQFSDTA AGRLNLMTHE SNVAGRDKVN YDRWGIAPSL
AFGLGTPTRV NLDYYHLESD DLPDSGIPYS IPTGGSSART SAHPSKPIDG GDSDNFYGLT
GRDFRKTRVD IATIAVEHDL SDSLTIKNTL RHGNSMQDYI LTQPDDSAGN VNNNGVWRRA
NTRVGNTATT TNQTDLFGEF FVGGFKNSFS TGVEFSKEDS DRQSYTVSPN SKLTCTGPGN
GGSCTSLSDP NPDDAWDGTI SRNYAGTKTS SKTRAIYAFD TLELTPEWLL NMGLRYDHFD
TKFRTYDASG ATVVNKNGVP TKGRDTSEFF TGQLGLVWKP AENGSIYVSY ATSATPPGAM
LGEGTEGNPL SGTTDRGGNI LASDMEPEET TNYEIGTKWD LLDERLSLAA ALFRTEKENA
RVQVDTTTYE NVGETRVQGI ELSASGKLTD KWQVFAGYTY LQARQIDGGP LGKANDGNQL
PNTPNNSASL WTTYSITPKL TVGGGAFYVD DVYGNVANTT MVDSYVRYDA MAAYKLTKNV
DLQLNVQNLT NEVYYDKAFS THFANQAAGR TALLTTSVHF
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