| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4310 |
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| Symbol | |
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| ID | 6113279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4750925 |
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| End bp | 4752082 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624104 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001751159 |
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| Protein GI | 170723471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.944105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.26992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC TCAAGAACCT CAGCAAAACC TTCAACGTCA ACGGCAAGGA CGTCAAAGCC
GTCGATTCGG TCAGCCTGAC CGTCAACGAA GGCGAAATCT GCGTGTTTCT CGGCCCATCG
GGCTGTGGCA AGAGCACCAC GCTGAAGATG ATCAACCGCC TGATCACGCC AACCTCCGGC
CAGGTGTTCA TCAATGGCGA AGACACCAGC GGCCTGGACG AAGTGACCTT GCGCCGCCAT
ATCGGCTATG TGATCCAGCA GATCGGCCTG TTCCCCAACA TGACCATCGA GGAGAACATC
ACCGTGGTCC CGCGCCTGCT CGGCTGGGAC AAGCAAAAGT GCCACGACCG CGCCCGTGAG
CTGATGCACA TGATCAAGCT CGAGCCCAAG CAGTACCTGC AACGCTACCC GCGTGAACTG
TCCGGTGGCC AGCAACAGCG CATCGGGGTG ATCCGTGCGC TGGCTGCAGA CGCGCCGGTG
CTGTTGATGG ACGAGCCGTT CGGCGCAGTC GACCCGATCA ACCGCGAGAT GATCCAGAAC
GAGTTTTTCG AAATGCAGCG GGCGCTGAAC AAGACCGTGA TCATGGTCAG CCACGACATC
GACGAAGCGA TCAAGCTGGC CGACAAGATT GCCATTTTCC GCGCCGGCAA GTTGCTGCAA
CTGGACCACC CGGACACCTT GCTGGCGCAC CCGGTGGATG ACTTCGTCAG CAACTTCGTG
GGCCAGGACA GCACCTTGAA ACGCCTGTTG CTGGTGCGCG CCGAAGATGC GGCGGACAAC
GCCCCGTCGG TAAGCCCAGA AACGCCCGTG AGCGATGCGC TGGAGCTGCT GGACGAGCAC
GACCGCCGCT ATGTGGTGGT CACCGATGCA CAGAACAAGG CGCTGGGGTA TGTACGCCGG
CGCGACATGC ACCGCCAGCA AGGCACTTGC GCGGATTTCC TGCGCCAGTT CAATGCAACG
GCTTCCCACG ATGAGCATCT GCGCATCCTG CTGTCGCGGA TGTACGAGTT CAACCGCGCC
TGGTTGCCGG TGCTCGATGC CGAACAGGTG TTCCTGGGCG AGGTGACGCA GGAGTCGATC
GCGGCTTACC TGAGCTCGGG GAGATCGCGC GGGGCCAAGA CCAGCATCGT CTCACCGGCT
GAGGCGGTGG TTTCCTGA
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| Protein sequence | MIELKNLSKT FNVNGKDVKA VDSVSLTVNE GEICVFLGPS GCGKSTTLKM INRLITPTSG
QVFINGEDTS GLDEVTLRRH IGYVIQQIGL FPNMTIEENI TVVPRLLGWD KQKCHDRARE
LMHMIKLEPK QYLQRYPREL SGGQQQRIGV IRALAADAPV LLMDEPFGAV DPINREMIQN
EFFEMQRALN KTVIMVSHDI DEAIKLADKI AIFRAGKLLQ LDHPDTLLAH PVDDFVSNFV
GQDSTLKRLL LVRAEDAADN APSVSPETPV SDALELLDEH DRRYVVVTDA QNKALGYVRR
RDMHRQQGTC ADFLRQFNAT ASHDEHLRIL LSRMYEFNRA WLPVLDAEQV FLGEVTQESI
AAYLSSGRSR GAKTSIVSPA EAVVS
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