Gene PputW619_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4309 
Symbol 
ID6113278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4750275 
End bp4750928 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID641624103 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001751158 
Protein GI170723470 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.473063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.447957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TCGATACCTT CGCCCACCTC GACTGGGCCT TGGTGCTGCA ACTGACCTGG 
CAGCACATCA TGCTGGTCGG CATTGCCGTC GGCCTGGCAA TCCTGGTCGG CGTGCCGCTG
GGCATCCTGA TGACCCGCTT CCCGGTGGTG GCCGGGCCGC TGCAAGCCAG CGCCACAGTG
CTGCTGACCA TCCCGTCGAT TGCCCTGTTC GGCCTGCTGC TGCCGTTCTA CTCCAAGTTC
GGCCAGGGCC TGGGGCCATT GCCTGCGATC ACTGCGGTGT TTCTTTATTC ACTGCTGCCC
ATCCTGCGCA ACACCTACCT CGCCCTGACC AACGTCGAGC CTGGCATCCG TGAAGCCGCG
CGCGGTATCG GCATGACCTT CGGCCAGCGC CTGCGCATGG TCGAGCTACC CATTGCCGTC
CCCGTCATCC TCGCCGGCGT GCGCACTGCC GTGGTGATGA ACATCGGCGT GATGACCATC
GCCGCGACCA TCGGTGCCGG TGGCCTGGGC GTGCTCATCC TCACCTCCAT CAGCCGCAGC
GACATGTCGA TGCTGCTGGT CGGCGCCGTA CTGGTCAGCC TGCTGGCAAT CATCGCCGAC
CTGCTCCTGC AAACCCTGCA ACGTGCCCTG ACTCCAGAAG GACTGCGCTC ATGA
 
Protein sequence
MSLLDTFAHL DWALVLQLTW QHIMLVGIAV GLAILVGVPL GILMTRFPVV AGPLQASATV 
LLTIPSIALF GLLLPFYSKF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT NVEPGIREAA
RGIGMTFGQR LRMVELPIAV PVILAGVRTA VVMNIGVMTI AATIGAGGLG VLILTSISRS
DMSMLLVGAV LVSLLAIIAD LLLQTLQRAL TPEGLRS