| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4306 |
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| Symbol | prfC |
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| ID | 6113275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4746609 |
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| End bp | 4748192 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624100 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001751155 |
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| Protein GI | 170723467 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.546945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC AGGCCGCCGA AGTCGCGAAG CGCCGCACTT TCGCAATCAT TTCCCACCCC
GACGCCGGTA AGACCACCAT CACCGAGAAA CTCCTGCTGA TGGGCAAGGC CATTGCCGTC
GCCGGTACCG TGAAGTCGCG CAAGTCCGAC CGCCACGCCA CCTCCGACTG GATGGAAATG
GAGAAGCAGC GCGGTATTTC CATCACCACC TCGGTGATGC AGTTCCCGTA CCGCGAGCAC
ATGATCAACC TGCTCGACAC CCCCGGCCAC GAAGACTTCT CGGAAGATAC CTATCGCACC
CTGACTGCAG TGGACTCGGC GCTGATGGTG CTCGACGGCG GTAAAGGTGT AGAGCCGCGG
ACCATTGCCC TGATGGACGT CTGCCGCCTG CGCGACACGC CCATCGTCAG CTTCATCAAC
AAACTCGACC GTGACATCCG CGACCCGATC GAACTGCTCG ACGAGATCGA AGCGGTACTG
AAGATCAAGG CCGCGCCGAT CACCTGGCCG ATCGGTTGCT ATCGCGACTT CAAGGGTGTG
TACCACCTTG CCGGCGACTA CATCATTGTC TACACCCCGG GCCACGGCCA TGAGCGTACC
GAGGCGAAGA TCATCGAGAA ACTCGACTCT GATGAAGCCC GTGCCCACCT GGGTGACGAG
TATGACCGCT TCCTCGAGCA GCTCGAGTTG GTGCAGGGCG CCTGCCATGA GTTCGATCAG
GACGAGTTCA TCAATGGCCA GCTGACGCCG GTATTCTTCG GTACCGCACT TGGCAACTTC
GGTGTCGACC ATGTGCTTGA CGCCGTTGTC GACTGGGCGC CGCGCCCGCT GGCCCGTGTA
GCCCACGAGC GTACCGTGGA GCCGGTTGAA GAGAAGTTCA CCGGCTTCGT GTTCAAGATC
CAGGCGAACA TGGACCCGAA ACACCGCGAC CGTATCGCCT TCATGCGCAT TTGCTCGGGC
AAGTACGAGA AGGGCATGAA GATGCGCCAC GTGCGTACCG GCAAGGATCT GCGCATCGGT
GACGCGCTGA CCTTCTTCTC GTCCGAGCGC GAGCAGCTCG AAGAAGCCTA CGCTGGCGAC
ATCATCGGCT TGCACAACCA TGGCACCATC CAGATCGGCG ACACCTTCAC CGAAGGCGAG
GCGCTCGGCT TCACCGGCAT CCCGCACTTC GCCCCGGAAC TGTTCCGCCG CGTGCGCCTG
AAGGACCCGC TCAAGTCCAA GCAGCTGCGC CAGGGCCTGC AGCAGCTGGC CGAAGAGGGC
GCGACCCAGG TGTTCTTCCC AGAACGCAGC AACGACATCA TCCTTGGTGC GGTCGGTGTG
CTGCAGTTCG ACGTGGTCGC CAGCCGCCTG AAGGAAGAGT ACAAGGTCGA GTGCGCCTAC
GAGCCGATCA CCGTGTGGTC GGCACGCTGG ATCAGCTGCG ACGACAAGAA GAAGCTCGAA
GACTTCCAGG TCAAGGCCAT GGAAAACCTG GCCATCGACG GTGGCGGTCA CCTGACCTAC
CTGGCCCCGA CCCGGGTCAA CCTGTCGCTG ATGGAAGAGC GCTGGCCGGA CGTCAAGTTC
CGCGCTACTC GCGAGCATCA CTGA
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| Protein sequence | MTNQAAEVAK RRTFAIISHP DAGKTTITEK LLLMGKAIAV AGTVKSRKSD RHATSDWMEM
EKQRGISITT SVMQFPYREH MINLLDTPGH EDFSEDTYRT LTAVDSALMV LDGGKGVEPR
TIALMDVCRL RDTPIVSFIN KLDRDIRDPI ELLDEIEAVL KIKAAPITWP IGCYRDFKGV
YHLAGDYIIV YTPGHGHERT EAKIIEKLDS DEARAHLGDE YDRFLEQLEL VQGACHEFDQ
DEFINGQLTP VFFGTALGNF GVDHVLDAVV DWAPRPLARV AHERTVEPVE EKFTGFVFKI
QANMDPKHRD RIAFMRICSG KYEKGMKMRH VRTGKDLRIG DALTFFSSER EQLEEAYAGD
IIGLHNHGTI QIGDTFTEGE ALGFTGIPHF APELFRRVRL KDPLKSKQLR QGLQQLAEEG
ATQVFFPERS NDIILGAVGV LQFDVVASRL KEEYKVECAY EPITVWSARW ISCDDKKKLE
DFQVKAMENL AIDGGGHLTY LAPTRVNLSL MEERWPDVKF RATREHH
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