| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4300 |
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| Symbol | dppF |
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| ID | 6113269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4740393 |
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| End bp | 4741361 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624094 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001751149 |
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| Protein GI | 170723461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG TTCTAACCGC ACGGGAGCTG ACCCGGCATT ACGAAGTGTC CCGCGGGCTG
TTCAAGGGCC ATGCCTTGGT GCGCGCACTC AATGGCGTGT CATTCGAGCT GGAAGCTGGC
AAGACCCTGG CCGTGGTGGG TGAGTCGGGT TGCGGCAAGT CCACGCTGGC GCGCGCACTG
ACATTGATCG AAGAGCCCTC TTCCGGCTCG TTGCAGATCG ACGGCACCGA GGTCAAAGGC
GCCAGCAAAA GCGAGCGCAA GCAGCTGCGC CGCGACGTCC AGATGGTGTT CCAGAGCCCC
TATGCCTCGC TCAACCCACG GCAGAAGATC GGCGATCAGT TGGCCGAACC GCTGCTGATC
AACACCTCCT TGAGCAAGGC CGAGCGGCGC GAAAAAGTGC AGAAGATGAT GGAGCAAGTG
GGGTTGCGGC CTGAGCATTA CCAGCGCTAC CCGCACATGT TCTCGGGCGG CCAGCGCCAG
CGCATCGCCC TGGCACGGGC GATGATGCTG CAACCCAAAG TGCTGGTGGC CGACGAACCG
ACCTCGGCGC TGGATGTGTC GATCCAGGCA CAGGTGCTGA ACCTGTTCAT GGACCTGCAG
AAGGAGTTCA ACACCGCCTA CGTGTTCATA TCCCACAACC TGGCAGTGGT ACGCCACGTA
GCGGATCAGG TGCTGGTGAT GTACCTGGGC CGGCCGGCGG AAATGGGGCC GAAGGAAGAT
ATCTACGAAA AGCCGCTGCA CCCGTACACC CAGGCCCTGC TTTCAGCGAC ACCGGCCATA
CACCCGGACC CGTTGAAGCC GAAGATCCGC ATTGCCGGCG AGCTGCCCAA CCCGCTCAAC
CCGCCGGATG GGTGCGCATT TCACAAACGC TGCCCGTATG CGACGGAGCG GTGTGGTGTT
GAAGTGCCGG CGTTTCGGCA GGTCGGGACC AGGCAAGTCG CCTGTCACTA TGCCGAGCAG
TTTCTTTAG
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| Protein sequence | MSVVLTAREL TRHYEVSRGL FKGHALVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL
TLIEEPSSGS LQIDGTEVKG ASKSERKQLR RDVQMVFQSP YASLNPRQKI GDQLAEPLLI
NTSLSKAERR EKVQKMMEQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP
TSALDVSIQA QVLNLFMDLQ KEFNTAYVFI SHNLAVVRHV ADQVLVMYLG RPAEMGPKED
IYEKPLHPYT QALLSATPAI HPDPLKPKIR IAGELPNPLN PPDGCAFHKR CPYATERCGV
EVPAFRQVGT RQVACHYAEQ FL
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