| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4294 |
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| Symbol | |
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| ID | 6113263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4732528 |
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| End bp | 4734120 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624088 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001751143 |
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| Protein GI | 170723455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.502669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACA CCACACTGTT TTCCACACTG CTCGCCGTTG GCCTGCTGAG CCAGGCATCG
GCCCTTCAGG CCGGTAACCT GGTGTTCTGC TCCGAGGGTA GCCCGGCTGG GTTCGACACA
GCCCAATACA CAACTGCCAC CGACAACGAT GCGGCAGAAC CGATCTACAA CCGCCTGGTG
GAATTCCAAC GCGGCGGTAC GGCAGTACAT CCCGCCCTGG CAACGAAGTG GGAAGTATCC
GACGATGGCC TGCGCTACAC CTTCCACCTG CGCGAAGGCG TGAAATTCCA CGCCAACAAA
GCATTCACCC CTAGCCGCGA CTTCAACGCC GATGACGTGC TGTTCACCTT CAACCGCATG
CTCGACCGCG AGCACCCGTT CCGCCAGGCT TACCCCACCG AGTTCCCCTA CTTCGTCAGC
ATGGGCCTGG ACAAGAACAT CGCAGGCATC GAAAAGACCG GCCCGATGAC CGTTGTCTTT
ACCCTGAACG AGGTCGATGC CGCCTTCGTA CAGAACCTGG CGATGAGCTT CGCTTCGGTG
CTTTCGGCTG AATATGCCGA GTATCTGATG GCGAGCGGGC GCCCCAGCGA CATCAACCAG
CAGCCTATCG GTACCGGCCC GTTCGTGTTT CAGCGCTACC AGAAGGATTC GCAGATCCGC
TTCAAAGGCA ACAAGGACTA CTGGGCGCCG GACGAGGTGA AACTCGACAA CCTGGTGTTT
TCGATCAACA CCGACCCATC GGTGCGCATC CAGAAGCTGC GCCGCGGCGA ATGCCAGGTC
ACCCTGCACC CACGCCCGGC CGACCTGCCA GCCCTCAAGC AAGACAGCAA GCTGCAGGTG
CTGCAACAAC CAGGCTTCAA CCTCGGCTAT ATCGCTTACA ACACCCAGCA CCCACCGTTC
GACCGCCTGG AGGTACGCCA GGCCATGGAC ATGGCAGTGA ACAAGCAGGC GATCCTGCAG
GCGGTGTATC AGGACTCCGG ACAACGCGCA GTCAACGCCA TGCCACCAAC CCAATGGTCC
TATGACGACA GCCTCAAGGA CGCACCCTAC GACCCTGAGA AGGCCCGCCA GCTGCTCAAG
CAGGCCGGGG TCAAGGAAGG CACCGAAGTC ACCCTGTGGG CCATGCCCGT GCAGCGCCCG
TACAACCCCA ACGCCAAGCT CATGGCCGAG ATACTTCAGG CCGACTGGAA CAAGCTCGGC
TTCAATGTGC GCATCGTCAG TTATGAATGG GGCGAGTACA TCAAGCGCAT GAAAAACGGC
GAGCACGACA TCGCCCTGAT CGGCTGGACC GGTGACAACG GCGACCCGGA TAACTGGCTG
GGCACCCTCT ACAGCTGCGA TGCCATCGGC AGCAACAACT ACTCGCTGTG GTGCGACCGG
CAGTACGACA GCCTGGTCAA GCAGGCCAAG CAGGTAACCG ACCGTGAGCA GCGCACGGTG
CTTTACCAGC AGGCCCAGCA ACGCCTCAAA CAGCAGGTGC CGATCACGCC GGTGGCTCAC
TCCACTGTGA ACCAGCCGCT CAGCGTCAAG GTGGCCGGCT TCAAGGTGAG CCCCTTTGGC
CGAAATGATT TTTCCGGAGT GAGCGTTGAT TGA
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| Protein sequence | MRHTTLFSTL LAVGLLSQAS ALQAGNLVFC SEGSPAGFDT AQYTTATDND AAEPIYNRLV
EFQRGGTAVH PALATKWEVS DDGLRYTFHL REGVKFHANK AFTPSRDFNA DDVLFTFNRM
LDREHPFRQA YPTEFPYFVS MGLDKNIAGI EKTGPMTVVF TLNEVDAAFV QNLAMSFASV
LSAEYAEYLM ASGRPSDINQ QPIGTGPFVF QRYQKDSQIR FKGNKDYWAP DEVKLDNLVF
SINTDPSVRI QKLRRGECQV TLHPRPADLP ALKQDSKLQV LQQPGFNLGY IAYNTQHPPF
DRLEVRQAMD MAVNKQAILQ AVYQDSGQRA VNAMPPTQWS YDDSLKDAPY DPEKARQLLK
QAGVKEGTEV TLWAMPVQRP YNPNAKLMAE ILQADWNKLG FNVRIVSYEW GEYIKRMKNG
EHDIALIGWT GDNGDPDNWL GTLYSCDAIG SNNYSLWCDR QYDSLVKQAK QVTDREQRTV
LYQQAQQRLK QQVPITPVAH STVNQPLSVK VAGFKVSPFG RNDFSGVSVD
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