| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4293 |
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| Symbol | |
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| ID | 6113262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4730767 |
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| End bp | 4732392 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624087 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001751142 |
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| Protein GI | 170723454 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.5263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC ACGCAGTCAT TCCGTTCCTG CTCGGCGCAG GCTTGCTGAC CGGCGCTCCG
CTTGCCCACG CCGCGTCCAA CCTGGTGTTC TGCTCCGAAG GCAGCCCCGC CGGCTTCGAC
CCGGGGCAAT ACACCACCGG AACCGACTTC GACGCCTCGG CCGAGACCGT ATTCAACCGC
CTGACCCAGT TCGAACGTGG CGGCACCGCG GTCATCCCGG GCCTGGCGAC CAAATGGGAC
GTGTCCGACG ACGGCAAGAC CTACACCTTC CACCTGCGCG AAGGGGTCAA GTTCCACACC
ACCGATTACT TCAAGCCAAG CCGCGAATTC AACGCAGACG ACGTGCTGTT CACCTTCAAC
CGCATGCTCG ACAAGAATCA CCCCTTCCGT AAGGCCTACC CCACTGAGTT CCCCTACTTC
ACCGACATGG GCATGGACAA CAACATCGCC AAGGTGGAGA AGCTCGACGA CCACACCGTC
AAGTTCACAC TCAACCAGGT GGACGCCGCG TTCATCCAGA ACCTGGCGAT GAGCTTTGCC
TCCGTACAGT CGGCCGAGTA CGCCGACCAG TTGCTCAAAG AGGGCAAGGC TGCAGACATC
AACCAGAAAC CGATCGGCAC CGGCCCGTTC GTGTTCAGCA AGTACCAGAA GGACGCCCAG
ATCCGTTTCA AGGGCAACAA GGATTACTGG AAACCCGAGG ACGTGAAGAT CGACAACCTG
ATCTTCGCGA TCACCACCGA TGCCTCGGTG CGCATGCAGA AGCTGAAGAA AAATGAGTGC
CAGGTGACCT TGTTCCCGCG CCCTGCCGAT ATCGAGCCGC TCAAGGCCAA CGACAAGCTG
CAGATGCCGC ACCAGGCCGG TTTCAACCTG GGCTACATCG CCTACAACGT GATGGACAAG
CTCAAGGGCA GTGACCAACC CAACCCGCTG GCTCAGCTGA AGGTGCGCCA GGCACTGGAC
ATGGCCGTCG ACAAGCAGAA GATCATCGAA TCGGTCTACC AGGGCGCCGG CCAGCTCGCC
GTCAATGCCA TGCCGCCGAC CCAGTGGTCC TACGACGAAA GCATCAAGGA CGTGCCGTAC
GACCCGGAAA AAGCCAAGCA ACTGCTCAAG GAAGCCGGGA TCAAGGAAGG CACCGAAATC
ACCCTGTGGG CCATGCCGGT GCAACGCCCG TATAACCCCA ACGCCAAGCT GATGGCCGAG
ATGCTGCAGG CTGACTGGAG CAAGGTCGGC ATCAAGGCGA AAATCGTCAG TTACGAGTGG
GGCGAGTACA TCAAGCGTTC CAAAGGCGGT GAGCAAGGCG CCATGCTGAT CGGCTGGAGC
GGCGACAACG GTGACCCGGA CAACTGGCTA GGCACCCTGT ATGGCTGCGA TGCCATCGAA
GGCAACAACT TCTCCAAGTG GTGCTACAAG CCCTACGACG ACCTGATCAA GCAGGCCAAG
GCCACTTCCG ACCAGGCCAA GCGCACCGAG CTGTATAAAC AGGCGCAGCA TATCCTCAAA
GATCAGGTAC CGATCACGCC AATCGCCCAC TCCACGGTCT ACCAGCCGAT GAGTGCCAAG
GTGAAGGACT TCAAGATCAG CCCGTTCGCA CTGAACGCCT TCTACGGCGT CAGTGTGGAG
AAATAG
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| Protein sequence | MLKHAVIPFL LGAGLLTGAP LAHAASNLVF CSEGSPAGFD PGQYTTGTDF DASAETVFNR
LTQFERGGTA VIPGLATKWD VSDDGKTYTF HLREGVKFHT TDYFKPSREF NADDVLFTFN
RMLDKNHPFR KAYPTEFPYF TDMGMDNNIA KVEKLDDHTV KFTLNQVDAA FIQNLAMSFA
SVQSAEYADQ LLKEGKAADI NQKPIGTGPF VFSKYQKDAQ IRFKGNKDYW KPEDVKIDNL
IFAITTDASV RMQKLKKNEC QVTLFPRPAD IEPLKANDKL QMPHQAGFNL GYIAYNVMDK
LKGSDQPNPL AQLKVRQALD MAVDKQKIIE SVYQGAGQLA VNAMPPTQWS YDESIKDVPY
DPEKAKQLLK EAGIKEGTEI TLWAMPVQRP YNPNAKLMAE MLQADWSKVG IKAKIVSYEW
GEYIKRSKGG EQGAMLIGWS GDNGDPDNWL GTLYGCDAIE GNNFSKWCYK PYDDLIKQAK
ATSDQAKRTE LYKQAQHILK DQVPITPIAH STVYQPMSAK VKDFKISPFA LNAFYGVSVE
K
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