Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4292 |
Symbol | |
ID | 6113261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4729741 |
End bp | 4730457 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624086 |
Product | hypothetical protein |
Protein accession | YP_001751141 |
Protein GI | 170723453 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAACC CTCGTCGCAG CGCTGCCCTG ATCCTGTCCT GCGGCCTGCT CGCCAGCCTG CCGGCTCTGG CGGCTGATGA GCCGCGCTAC AACCAGGTAT CGCTGCGTGC CGAAGTCAGC AAGGAAGTGC CCCGCGACCT GATGGTCGTG ACCCTTTATA GCGAAGCGCA GAACAGCGAC CCGGGCAAGC TTGCCAAACA AATCACCGAA ACCATGAACA AGGCCGTGCA GCAGGCCCGC CAGGTCAAGG ACGTGAAAAT CACCCAGGGC AGCCGCAACA GCTACCCGGT CTACGACAGC AAGGGGCAGA AGATCACCGG CTGGCGCGAG CGTGCCGAAG TGCGCCTGGA AAGCGCCGAC TTCCCGGCCC TCTCTCAACT CAGTGCCGAC CTGCTGCAGG ACCTTAAGAT GGGCGGCATG GACTTCTCCA TCGCCCCGGC CACGCGCAAG GCCAGCGAAG ACGCCTTGCT CAAGGATGCG GTCAATGCCT TCAAGGCCCG CGCGCAACTG GCAACCGAAG CCCTGGGTGG CAAGGGCTAT AAAGTGGTCA GCCTGAACCT CAACAGCAGT GGCTACCCAC GCCCCTATCT GCGCAGTGCG CCAATGGCCA TGAAAGCCAT GGGTGCCGAC GAAGCAGCAC CGGCGCCAGA TATCGAGGCA GGCACCAGCG AAGTCAGCAT GAACGCTGAC GGCCTGATCG AAGTGCAGAT GCCCTGA
|
Protein sequence | MPNPRRSAAL ILSCGLLASL PALAADEPRY NQVSLRAEVS KEVPRDLMVV TLYSEAQNSD PGKLAKQITE TMNKAVQQAR QVKDVKITQG SRNSYPVYDS KGQKITGWRE RAEVRLESAD FPALSQLSAD LLQDLKMGGM DFSIAPATRK ASEDALLKDA VNAFKARAQL ATEALGGKGY KVVSLNLNSS GYPRPYLRSA PMAMKAMGAD EAAPAPDIEA GTSEVSMNAD GLIEVQMP
|
| |