Gene PputW619_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4292 
Symbol 
ID6113261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4729741 
End bp4730457 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content63% 
IMG OID641624086 
Producthypothetical protein 
Protein accessionYP_001751141 
Protein GI170723453 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACC CTCGTCGCAG CGCTGCCCTG ATCCTGTCCT GCGGCCTGCT CGCCAGCCTG 
CCGGCTCTGG CGGCTGATGA GCCGCGCTAC AACCAGGTAT CGCTGCGTGC CGAAGTCAGC
AAGGAAGTGC CCCGCGACCT GATGGTCGTG ACCCTTTATA GCGAAGCGCA GAACAGCGAC
CCGGGCAAGC TTGCCAAACA AATCACCGAA ACCATGAACA AGGCCGTGCA GCAGGCCCGC
CAGGTCAAGG ACGTGAAAAT CACCCAGGGC AGCCGCAACA GCTACCCGGT CTACGACAGC
AAGGGGCAGA AGATCACCGG CTGGCGCGAG CGTGCCGAAG TGCGCCTGGA AAGCGCCGAC
TTCCCGGCCC TCTCTCAACT CAGTGCCGAC CTGCTGCAGG ACCTTAAGAT GGGCGGCATG
GACTTCTCCA TCGCCCCGGC CACGCGCAAG GCCAGCGAAG ACGCCTTGCT CAAGGATGCG
GTCAATGCCT TCAAGGCCCG CGCGCAACTG GCAACCGAAG CCCTGGGTGG CAAGGGCTAT
AAAGTGGTCA GCCTGAACCT CAACAGCAGT GGCTACCCAC GCCCCTATCT GCGCAGTGCG
CCAATGGCCA TGAAAGCCAT GGGTGCCGAC GAAGCAGCAC CGGCGCCAGA TATCGAGGCA
GGCACCAGCG AAGTCAGCAT GAACGCTGAC GGCCTGATCG AAGTGCAGAT GCCCTGA
 
Protein sequence
MPNPRRSAAL ILSCGLLASL PALAADEPRY NQVSLRAEVS KEVPRDLMVV TLYSEAQNSD 
PGKLAKQITE TMNKAVQQAR QVKDVKITQG SRNSYPVYDS KGQKITGWRE RAEVRLESAD
FPALSQLSAD LLQDLKMGGM DFSIAPATRK ASEDALLKDA VNAFKARAQL ATEALGGKGY
KVVSLNLNSS GYPRPYLRSA PMAMKAMGAD EAAPAPDIEA GTSEVSMNAD GLIEVQMP