Gene PputW619_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4284 
SymbolgatA 
ID6113253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4720530 
End bp4721981 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID641624078 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001751133 
Protein GI170723445 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAT TGACCCTGGC CGAGATCGCC CGCGGGCTCG CCGACAAGTC GTTTTCCTCC 
GAAGAGCTGA CCGGCGCCCT GCTGGCGCGT ATCCAGCAGC TCGACCCGCA ACTCAACAGC
TTCATCAGCG TCACCGAGGA GCTGGCCCTG GGCCAGGCCC GTGCCGCCGA CGCCCGTCGC
GCCGCCGGCG AAACCGGCGC ACTGCTGGGC GCCCCAATCG CCCACAAGGA CCTGTTCTGC
ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCGTAT
GACGCCACCG TGGTCGCCAA GCTGGCCGAG GCCGGCATGG TCACCCTGGG CAAGACCAAC
ATGGACGAAT TCGCCATGGG GTCTGCCAAC GAATCCAGCC ACTATGGCGC GGTGAAGAAC
CCCTGGAACC TCGAGCACGT GCCAGGCGGC TCGTCCGGCG GTTCCGCTGC GGCCGTGGCT
GCCCGCCTGC TGCCCGCGAC CACCGGCACC GATACCGGCG GCTCGATCCG ACAGCCGGCG
GCACTGACCA ACCTCACGGG CCTCAAACCG ACGTACGGTC GTGTTTCGCG CTGGGGCATG
ATCGCCTATG CATCCAGCCT CGACCAGGGT GGCCCGCTGG CCCGCACCGC CGAAGACTGC
GCGCTGCTGC TGCAAGGCAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATTGACGAA
CCGGTGCCGG ACTACAGCGC CAACCTGAAT GCCTCGCTGC AAGGCCTGCG CATCGGCCTG
CCAAAAGAGT ACTTCGGCGC CGGCCTCGAC CCGCGCATCG CCGAACTGGT ACAGGCCAGC
GTCAAGGAGC TGGAAAAGCT CGGTGCAGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG
CACGCAATCC CTGCGTATTA CGTGATCGCG CCGGCCGAAG CCTCTTCCAA CCTGTCGCGA
TTCGACGGCG TGCGCTTCGG CTACCGCTGC GACGAGCCCA AAGACCTGAC CGACCTGTAC
AAGCGCTCCC GTGGCGAAGG CTTCGGTGCC GAAGTCCAGC GCCGCATCAT GGTTGGGACC
TACGCCCTGT CGGCTGGCTA CTACGACGCC TACTACGTCA AGGCGCAGCA GATCCGCCGC
CTGATCAAAA ACGACTTCAT GGCCGCCTTC GAAGGCGTCG ACCTGATCCT TGGCCCGACC
ACGCCGAACC CGGCCTGGAA GCTCGGCGCC AAGAGCAGCG ACCCGGTCGC GGCGTACCTT
GAAGACGTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CGGGCCTGTC GATGCCAGCC
GGCTTCGTCG ATGGCCTGCC GGTCGGCGTG CAGCTGCTGG CCCCGTACTT CCAGGAAGGC
CGCCTGCTCA ATGTCGCGCA CCGCTACCAG CAGGTCACCG ACTGGCACAC CCGCGCCCCC
AACGGCTTCT GA
 
Protein sequence
MHQLTLAEIA RGLADKSFSS EELTGALLAR IQQLDPQLNS FISVTEELAL GQARAADARR 
AAGETGALLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIDE
PVPDYSANLN ASLQGLRIGL PKEYFGAGLD PRIAELVQAS VKELEKLGAV VKEISLPNMQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC DEPKDLTDLY KRSRGEGFGA EVQRRIMVGT
YALSAGYYDA YYVKAQQIRR LIKNDFMAAF EGVDLILGPT TPNPAWKLGA KSSDPVAAYL
EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP
NGF