Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4284 |
Symbol | gatA |
ID | 6113253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4720530 |
End bp | 4721981 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641624078 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001751133 |
Protein GI | 170723445 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAT TGACCCTGGC CGAGATCGCC CGCGGGCTCG CCGACAAGTC GTTTTCCTCC GAAGAGCTGA CCGGCGCCCT GCTGGCGCGT ATCCAGCAGC TCGACCCGCA ACTCAACAGC TTCATCAGCG TCACCGAGGA GCTGGCCCTG GGCCAGGCCC GTGCCGCCGA CGCCCGTCGC GCCGCCGGCG AAACCGGCGC ACTGCTGGGC GCCCCAATCG CCCACAAGGA CCTGTTCTGC ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCGTAT GACGCCACCG TGGTCGCCAA GCTGGCCGAG GCCGGCATGG TCACCCTGGG CAAGACCAAC ATGGACGAAT TCGCCATGGG GTCTGCCAAC GAATCCAGCC ACTATGGCGC GGTGAAGAAC CCCTGGAACC TCGAGCACGT GCCAGGCGGC TCGTCCGGCG GTTCCGCTGC GGCCGTGGCT GCCCGCCTGC TGCCCGCGAC CACCGGCACC GATACCGGCG GCTCGATCCG ACAGCCGGCG GCACTGACCA ACCTCACGGG CCTCAAACCG ACGTACGGTC GTGTTTCGCG CTGGGGCATG ATCGCCTATG CATCCAGCCT CGACCAGGGT GGCCCGCTGG CCCGCACCGC CGAAGACTGC GCGCTGCTGC TGCAAGGCAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATTGACGAA CCGGTGCCGG ACTACAGCGC CAACCTGAAT GCCTCGCTGC AAGGCCTGCG CATCGGCCTG CCAAAAGAGT ACTTCGGCGC CGGCCTCGAC CCGCGCATCG CCGAACTGGT ACAGGCCAGC GTCAAGGAGC TGGAAAAGCT CGGTGCAGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG CACGCAATCC CTGCGTATTA CGTGATCGCG CCGGCCGAAG CCTCTTCCAA CCTGTCGCGA TTCGACGGCG TGCGCTTCGG CTACCGCTGC GACGAGCCCA AAGACCTGAC CGACCTGTAC AAGCGCTCCC GTGGCGAAGG CTTCGGTGCC GAAGTCCAGC GCCGCATCAT GGTTGGGACC TACGCCCTGT CGGCTGGCTA CTACGACGCC TACTACGTCA AGGCGCAGCA GATCCGCCGC CTGATCAAAA ACGACTTCAT GGCCGCCTTC GAAGGCGTCG ACCTGATCCT TGGCCCGACC ACGCCGAACC CGGCCTGGAA GCTCGGCGCC AAGAGCAGCG ACCCGGTCGC GGCGTACCTT GAAGACGTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CGGGCCTGTC GATGCCAGCC GGCTTCGTCG ATGGCCTGCC GGTCGGCGTG CAGCTGCTGG CCCCGTACTT CCAGGAAGGC CGCCTGCTCA ATGTCGCGCA CCGCTACCAG CAGGTCACCG ACTGGCACAC CCGCGCCCCC AACGGCTTCT GA
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Protein sequence | MHQLTLAEIA RGLADKSFSS EELTGALLAR IQQLDPQLNS FISVTEELAL GQARAADARR AAGETGALLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIDE PVPDYSANLN ASLQGLRIGL PKEYFGAGLD PRIAELVQAS VKELEKLGAV VKEISLPNMQ HAIPAYYVIA PAEASSNLSR FDGVRFGYRC DEPKDLTDLY KRSRGEGFGA EVQRRIMVGT YALSAGYYDA YYVKAQQIRR LIKNDFMAAF EGVDLILGPT TPNPAWKLGA KSSDPVAAYL EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP NGF
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