Gene PputW619_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4281 
Symbol 
ID6113250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4717758 
End bp4718759 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID641624075 
Productrod shape-determining protein MreC 
Protein accessionYP_001751130 
Protein GI170723442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.535486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTCG ATGCGCGCTT TGACCTGCTC AAGCCCGTGC GCAGCCAGAT GGGCCTGGTA 
CTGATGGAAT CGTACTGGAT CACCGACTTG CCTCAGCGGA TGTGGCAAGG CGTGGCGGGC
CAGTTCGGCA GCCGTAACGA ACTGATCGCG GAAAACGAGA AACTCAAGAC CGAAGCCCTG
CTGCTGCAGG GGCGCTTGCA GAAGCTGGCG GCCCTGACCG AGCAGAACGT GCGCCTGCGC
GAGTTGCTCA ACTCCTCCGC ACTGGTCAAC GAGAAGGTCG AGGTGGCCGA GCTGATCGGC
GTCGACCCTA ACCCGTTCAC CCATCGTATC CTGATCAACA AAGGCGAGCG CGACGGTGTG
TTCCTTGGCC AGCCGGTGCT CGATGCCCGC GGCCTGATGG GTCAGGTGGT CGAGCTGATG
CCCTACACCG CACGAGTGTT GCTGCTGACC GACACCACCC ACAGCATCCC GGTACAGGTC
AACCGTAACG GCCTGCGCGC GATTGCCAGC GGTACTGGCA ACCCGGAGCG TCTGGAGCTG
CGCCATGTTG CCGACACGGC TGATATCAAG GAAGGCGACT TGTTGGTGAG CTCCGGCATG
GGCCAGCGCT TCCCGGCCGG CTACCCGGTG GCCACGGTCA ACGAAGTGAT CCATGACTCC
GGCCAGCCGT TCGCGATAGT GCGCGCCATT CCGACCGCCG CGCTCAATCG CAGCCGCTAC
ATGTTGCTGG TGTTCAGCGA CCGGCGCTCT CCGGAGCAGC GTGCCACCGA CGCGGCGCTC
GCCCAGGAAG AGGCAGACCG CAAAGACGCA GCGAGCCCTG CTCAGCCTGG TGCCAATGGC
GAGCCCGCTG CCCCCGTTAC GCCTGCACCT GCAACGCCTG CCCCGGCCAC GCCCGCGGTC
CCTGCCACAG CGGTACCGGC CCCGCCCGCT GCAGCACCGG CGGCGGCACC CGCCAGCCCT
GCCGCAGCGC CTGCGGCACC TGCCCAGCCC CGGAGGCAAT GA
 
Protein sequence
MVVDARFDLL KPVRSQMGLV LMESYWITDL PQRMWQGVAG QFGSRNELIA ENEKLKTEAL 
LLQGRLQKLA ALTEQNVRLR ELLNSSALVN EKVEVAELIG VDPNPFTHRI LINKGERDGV
FLGQPVLDAR GLMGQVVELM PYTARVLLLT DTTHSIPVQV NRNGLRAIAS GTGNPERLEL
RHVADTADIK EGDLLVSSGM GQRFPAGYPV ATVNEVIHDS GQPFAIVRAI PTAALNRSRY
MLLVFSDRRS PEQRATDAAL AQEEADRKDA ASPAQPGANG EPAAPVTPAP ATPAPATPAV
PATAVPAPPA AAPAAAPASP AAAPAAPAQP RRQ