| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4278 |
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| Symbol | |
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| ID | 6113247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4715113 |
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| End bp | 4716570 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624072 |
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| Product | ribonuclease |
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| Protein accession | YP_001751127 |
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| Protein GI | 170723439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0898505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AGATCCTGAT CAACATCACC CCGATGGAGT CGCGTGTGGC GGTGGTGGAA
AACGGGGTGC TGCAGGAAGT GCACGTCGAG CGCACCCAGC GTCGCGGCAT CGTCGGCAAT
ATCTACAAGG GCAAAGTGGT GCGGGTGCTA CCAGGCATGC AGGCGGCGTT CGTCGATATC
GGCCTGGAGC GCGCCGCGTT CATTCATGCC TCGGAGATTT CCCAGCGCGA AGGTTCTGCC
GTGGAGACCA TCACTGCACT GGTACACGAG GGCCAGGCCC TGGTGGTGCA GGTGACCAAA
GACCCCATCG GTAGCAAGGG CGCACGGCTG ACCACCCAGC TGTCCATACC GTCGCGTTAC
CTGGTGTACA TGCCGCGCAG CAGCCACGTC GGTATTTCCC TGAAGATCGA AGACGAAGCC
GAACGTGATC GCCTCAAGCA GGTGGTCAGT GACTGCATGG ACAGCGAAGA CATCAAGAAC
GCTGGCGGTT TCATCCTGCG CACTGCTGCC GAGGGCGCAC GGGCCGAAGA GATCCTGCAG
GACATCCGCT ACCTGCGCCG TCTGTGGGAG CAGATTGGCA GCCAGATCCA GACCTGCGGT
GCCCCGACGG TCATCTACGA GGATCTTGGC CTGGCCTTGC GCACACTGCG CGACCTGGTC
AACCCCAAGA TCGAGAAGAT CCGCATCGAC TCCCGGGAAA CCTTCCAGAA AACCACGCAG
TTCGTTGCCG AACTGATGCC GGAGATCGCC GACCGCCTGG AGCACTACCC GGGCGAACGG
CCGATCTTCG ACCTGTATGG CGTCGAGGAC GAAATCCAGC GCGCACTGGA TCGCAAGGTG
CCGCTCAAGT CCGGTGGCTA TCTGGTGGTC GACCCCGCCG AGGCAATGAC TACCATCGAC
GTCAACACCG GCGCCTTCGT CGGCCACCGC AACCTCGAAG AGACCATCTT CAAGACCAAC
CTCGAAGCGG CCACGGCAAT CGCCCGGCAG CTGCGCCTGC GCAACATTGG CGGGATCATC
ATCATCGACT TCATCGACAT GGAGGATGAG GACCATCAAC GCCAGGTGCT GCGTACGCTG
GAGAAGCAGC TTGAACGTGA CCATGCCAAG ACCAACATCA TCGGCATCAC CGAGCTGGGC
CTGGTACAGA TGACCCGCAA GCGCACGCGT GAGAGCCTGG AGCAGGTACT GTGCGAACCG
TGCACCGCCT GCCAGGGGCG TGGCAAGCTG AAAACCCCGG AAACGATCTG TTATGAAATT
TTCCGCGAGA TCCTTCGTGA AGCCCGCGCC TATCAGGCAG AAGGCTATCG TGTACTGGCC
AACCAGAAGG TGGTCGACCG CCTGCTCGAT GAAGAATCCG GCAACGTGGC CGAGCTAGAA
ACGTTCATCG GTCGAACCAT TCGCTTCCAG GTCGAGTCGA TGTACTCGCA GGAGCAGTAC
GATGTGGTGC TGCTCTGA
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| Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGKVVRVL PGMQAAFVDI
GLERAAFIHA SEISQREGSA VETITALVHE GQALVVQVTK DPIGSKGARL TTQLSIPSRY
LVYMPRSSHV GISLKIEDEA ERDRLKQVVS DCMDSEDIKN AGGFILRTAA EGARAEEILQ
DIRYLRRLWE QIGSQIQTCG APTVIYEDLG LALRTLRDLV NPKIEKIRID SRETFQKTTQ
FVAELMPEIA DRLEHYPGER PIFDLYGVED EIQRALDRKV PLKSGGYLVV DPAEAMTTID
VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNIGGII IIDFIDMEDE DHQRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQVLCEP CTACQGRGKL KTPETICYEI
FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVAELE TFIGRTIRFQ VESMYSQEQY
DVVLL
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