| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4271 |
|---|
| Symbol | fumC |
|---|
| ID | 6113240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4704944 |
|---|
| End bp | 4706320 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624065 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001751120 |
|---|
| Protein GI | 170723432 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA CCCGTATCGA GCGTGACAGC ATGGGTGAAC TGCAGGTGCC GGCCCTGGCC
CTGTATGGCG CTCAGACCCA GCGCGCGGTC GACAACTTCC CGATCAGCGG CCAACGTATG
CCGGCCCAGT TCATTCGTGC TCTGCTGCTG GCCAAGGCTG CGGCAGCCAA GGCCAACATC
GAGCTGGAGC AGATTTCCGC CGCCCAGGGC CAAGCCATCG TCAAGGCGGT CGAGCACCTG
CTCGCCGAGG ACTTCATCCA GCACTTCCCG GTGGACGTGT ACCAGACTGG CTCCGGCACC
AGCTCGAACA TGAATGCCAA CGAGGTGATC GCCACCCTGG CCAGCCGCCT GCTCGGTGAG
CAGGTCAGTG CCATCGACCA CGTCAACTGC GGCCAGAGCA GCAACGACAT CATCCCGACC
ACCATCCATG TCAGTGCCGC ACTGGCGCTG CATGAGCAGT TGCTGCCCGC CCTGGCTCAC
CTGGTTGAGG TGATCGAGGC CAAATCGGTG CAAGTGCATC AGTACGTGAA GACTGGCCGT
ACCCATCTGA TGGATGCCAT GCCGGTGCGC ATGAGCCAGG TGCTCGATGG CTGGGCAGCA
CAGATCAAAG GCGCCAACGC GCACATCGAA GCGACCCTGC CGAGCCTTCA GGCCCTGGCC
CAGGGTGGCA CTGCCGTTGG CACCGGGATC AACGCCCATC CGCAGTTCGC CGCAAGCTTT
GCCCGTCAGC TGAGCGGCCT CACCCAGGTC GAGTTCACCC GGGGACAGAA CCTGTTCGCC
CTGATCGGCT CCCAGGACAC CGCCGTGGCG CTGTCCGGCC AGCTCAAGAC CACTGCCGTG
GCACTGATGA AAATCGCCAA CGACCTGCGC TGGATGAACT CCGGCCCGCT CGCCGGCCTC
GGTGAAATCG AACTGCAAGG CCTGCAGCCT GGCTCCTCGA TCATGCCGGG CAAGGTCAAC
CCGGTGATCC CGGAAGCCAC AGCCATGGTG GCCGCCCAGG TGATCGGCAA CGACGCGACC
ATCGCCATTG CCGGCCAGTC GGGCAACTTC GAGCTCAACG TGATGCTGCC GGTGATTGCC
CGCAACCTGC TGGAGAGCAT CGAGCTGATG GCCAATGCCA GCCGCCTGCT GGCCGACAAG
GCCATCTCCA GCTTCAAGGT CAATGAGGGC AAGCTCAAGG AAGCCCTGGC GCGCAACCCG
ATCCTGGTCA CCGCGCTGAA CCCGATCATC GGCTACCTCA AGGCCGCTGA GATCGCCAAG
ACCGCCTACA AACAGGGCCG GCCGATCATC GACGTGGCGC TGGAGCATAC CGACCTGTCG
CGCGATCAGC TCGAGGCGCT GCTGGACCCG GAAAAACTCA CCGCTGGGGG CATCTGA
|
|---|
| Protein sequence | MSDTRIERDS MGELQVPALA LYGAQTQRAV DNFPISGQRM PAQFIRALLL AKAAAAKANI
ELEQISAAQG QAIVKAVEHL LAEDFIQHFP VDVYQTGSGT SSNMNANEVI ATLASRLLGE
QVSAIDHVNC GQSSNDIIPT TIHVSAALAL HEQLLPALAH LVEVIEAKSV QVHQYVKTGR
THLMDAMPVR MSQVLDGWAA QIKGANAHIE ATLPSLQALA QGGTAVGTGI NAHPQFAASF
ARQLSGLTQV EFTRGQNLFA LIGSQDTAVA LSGQLKTTAV ALMKIANDLR WMNSGPLAGL
GEIELQGLQP GSSIMPGKVN PVIPEATAMV AAQVIGNDAT IAIAGQSGNF ELNVMLPVIA
RNLLESIELM ANASRLLADK AISSFKVNEG KLKEALARNP ILVTALNPII GYLKAAEIAK
TAYKQGRPII DVALEHTDLS RDQLEALLDP EKLTAGGI
|
|---|
| |