Gene PputW619_4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4264 
Symbol 
ID6113233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4700939 
End bp4701247 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content53% 
IMG OID641624058 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_001751113 
Protein GI170723425 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCA ATATCAGTGG ACAGCATGTA GAAGTCACCG AGCCGCTGCG CGATTACGTG 
CTTGAAAAAC TCGCCAGGGT GGAAAGTCAC TTCGACAAGA TCACCAACGT GCAGGTCATC
ATGAAAGTCG AGAAGCTGCA GCAGAAGGTC GAAGCGATCC TGCAGATTCC AGGCGGTGAA
GTGGTTGCCA ACGCCGAACA CGAAGACATG TATGCAGCGA TCGATGCCTT GGCCGACAAG
CTCGACCGCC AACTGAAAAA ACACAAGGAA AAACAGCAAA GTCTGCTGCA AGGTGCAGCC
GCCCGCTGA
 
Protein sequence
MQVNISGQHV EVTEPLRDYV LEKLARVESH FDKITNVQVI MKVEKLQQKV EAILQIPGGE 
VVANAEHEDM YAAIDALADK LDRQLKKHKE KQQSLLQGAA AR