Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4247 |
Symbol | |
ID | 6113216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4686922 |
End bp | 4687572 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624041 |
Product | GntR domain-containing protein |
Protein accession | YP_001751096 |
Protein GI | 170723408 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGTG AATTGGCCAA GCGATCTTTG GTAGAGCTCG CTGTGGAGCG CATGCGCGAG CGCATCCTCC AGGGTGACTG GCGGGTAGGG CAGCGCCTGC CCACCGAGCC GGAGCTGGCC CTGGAGTTGG GCATCAGCCG CAATACCGTG CGTGAGGCCA TGCGCGTGCT GGCCTTCAGC GGCCTGGTGG AAATCCGCCA GGGCGACGGC AGTTACCTGC GTACTTGCCA GGACCCGCTG CAGGCTGTAC TGGCAATGTC CCGCTGCACG CTGGAACAGG CGAGGGAAAC GCGGCACATC CTCGAAACCG AGGCGATAGG CTTGGCAGCA CTGCGGCGTA CCGATGACGA CTTGCGTGCC CTGCGCATCG CGCTAAAGGG CAGCGCCGAG CATTTTCATG GTGATGTGGA TGCTTATGTC AGTTGCGACC TGGCGTTTCA CCAACGCCTG ATCGACGCTG CACACAACCC GGCGCTTAGC GAGTTGTACC GCTATTTCTC GGGTGTCGTG GCTGCCGCGC TGCAGCACAA CATGGCCACT GTTCCGCGCT GCCAGGCCAC CTTCGATCTG CATGGTCAGA TCCTCGACGC CATCGAACAA CGCGATGCGG AGCGGGCCAA GTGCCTGAGC CGCACCCTCA TCGAATCCTG A
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Protein sequence | MGSELAKRSL VELAVERMRE RILQGDWRVG QRLPTEPELA LELGISRNTV REAMRVLAFS GLVEIRQGDG SYLRTCQDPL QAVLAMSRCT LEQARETRHI LETEAIGLAA LRRTDDDLRA LRIALKGSAE HFHGDVDAYV SCDLAFHQRL IDAAHNPALS ELYRYFSGVV AAALQHNMAT VPRCQATFDL HGQILDAIEQ RDAERAKCLS RTLIES
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