| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4244 |
|---|
| Symbol | |
|---|
| ID | 6113213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4684731 |
|---|
| End bp | 4685015 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641624038 |
|---|
| Product | GIY-YIG nuclease superfamily protein |
|---|
| Protein accession | YP_001751093 |
|---|
| Protein GI | 170723405 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG TATCCGAGAA CCCCATCTGC AAACCTTGGT ATGTCTACCT GGTGAGGGCT
GCCAATGGTT CGCTGTACTG CGGCATCAGT GATGATCCGC AGCGGCGTTT CGTAGCGCAT
CAGAAAGGGC AGGGGGCGCG GTATTTCAAG ACCAGCCCGG CGCAGGCGCT GGTCTACGTC
GAGCAATGGC CGGACAAGGG CGAGGCATTG CGCCAGGAGC GCCTGGTGAA GAAGTTGCGC
AAGGCTGCGA AGGAGGCTTT GGTCGCCTCC TATACCAGCG GTTGA
|
|---|
| Protein sequence | MSDVSENPIC KPWYVYLVRA ANGSLYCGIS DDPQRRFVAH QKGQGARYFK TSPAQALVYV
EQWPDKGEAL RQERLVKKLR KAAKEALVAS YTSG
|
|---|
| |