| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4235 |
|---|
| Symbol | |
|---|
| ID | 6113204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4674074 |
|---|
| End bp | 4675135 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641624029 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_001751084 |
|---|
| Protein GI | 170723396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGC TCGACCGCTA CATCGGCCAG AGCGTGCTGA TGGCCATCCT GGCCGTGCTG
GGCATCATTC TGGGCCTGGC TTCGTTGTTC GCATTCATCG ATGAGATGAG CGATCTGAGC
GATACCTATA CCGTCATGGA TGCTGGCTGG TTCACATTGC TCACGGCGCC CCGCCGGCTC
TACGACATGT TGCCGATGGC GGCACTGATC GGCTGCCTGA TCGGCCTGGG CAGCCTGGCC
AGCAGCAGCG AACTGACCAT CATGCGTGCC GCCGGGGTTT CCATCGGGCG TATCGTCTGG
GCGGTGATGA AACCGATGCT GGTGCTGATG CTGGTCGGCC TGCTGATTGG TGAGTACGTG
GCGCCGATCA GCGAGAACAA GGCCCAGGCC GACCGTTCCC TGGCCCAGGG CGGCGGTGAG
GCGCAGAGCT CCAAGCGCGG CATGTGGCAC CGTCAGGGTG ATGAGTTCGT GCATATCAAC
TCGGTGCAGC CCAATGGCCT GTTGCTGGGT GTGACCCGCT ACCGCTTCGA TGACGAGCGT
AAGATCGTCA CGTCGAGTTT CGCGCGCCGG GCGCGTTATG AGAACGATCA TTGGGTACTC
AGCGATGTCA GCACCACCTA CTTCCGTGGC GATCACACCG AAGTGGTGAA GAGCTCGGAA
GAACGCTGGG ATGTCTCGGT GACCCCACAA TTGCTCAATA CCGTGGTGCT GGCCCCGGAG
TCGCTGTCGA TCACCGGGCT GTGGGACTAC ATCCACTACC TGTCCGACCA GGGCCTGAAC
AATGCCCGTT ACTGGCTGGC GTTCTGGACC AAGGTGCTGC AGCCGGCGGT GACTGCGGCC
TTGGTGCTGA TGGCGATTTC GTTCATCTTC GGGCCGCTGC GTTCGGTAAC CCTCGGCCAG
CGTGTGTTCA CTGGCGTGCT GGTGGGGTTT GTATTCCGTA TTGCCGGCGA CCTGCTTGGC
CCTTCGAGCC AGGTGTTCGG CTTCCCGCCG CTGTTGGCGG TAGTGATCCC GGCTGGTGTG
TGTGCACTGG CCGGCTTATG GTTGCTGCGC CGGGCGGGAT GA
|
|---|
| Protein sequence | MVKLDRYIGQ SVLMAILAVL GIILGLASLF AFIDEMSDLS DTYTVMDAGW FTLLTAPRRL
YDMLPMAALI GCLIGLGSLA SSSELTIMRA AGVSIGRIVW AVMKPMLVLM LVGLLIGEYV
APISENKAQA DRSLAQGGGE AQSSKRGMWH RQGDEFVHIN SVQPNGLLLG VTRYRFDDER
KIVTSSFARR ARYENDHWVL SDVSTTYFRG DHTEVVKSSE ERWDVSVTPQ LLNTVVLAPE
SLSITGLWDY IHYLSDQGLN NARYWLAFWT KVLQPAVTAA LVLMAISFIF GPLRSVTLGQ
RVFTGVLVGF VFRIAGDLLG PSSQVFGFPP LLAVVIPAGV CALAGLWLLR RAG
|
|---|
| |