| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4218 |
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| Symbol | |
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| ID | 6113187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4652606 |
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| End bp | 4655194 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624012 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001751067 |
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| Protein GI | 170723379 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAG GTCCAACTAG CCCGTCCCCT CTTCCCCGCC GTACCGGCCA GCTGTCCCTG
CTGACCCTGG CCCTGCTCGC CAGTGGCGCC TGCGGCTTGC CGGCGCTGGC CGCAGAACCT
GCGCAGGCGA CAAGCCCGCG CATGGGCGAC TACCGCTTCA GCATCACCCA GCAGCCCCTG
GTCGAGGCAA TCAACGCCTT CAGCCAGGTG ACCGGCTGGC AGGTGGGTTT CAGCGCCGAA
CTGGCCGACG GTGTGGCTTC GCCAGGTGTC CACGGCTCGC TGCCTCCGGA AGCGGCACTG
AAACAACTGC TGCAAGGTAC CGGCCTGGGC TATCGCAAGA TCAGCAACGG CAATGTGGTG
CTGGAGCGCC AGACGGCGGG CAATGCCATT GCCCTGCAGC AATTGACCGT CAGCGCCACC
CGTAGCGCCC AGGACGTCAG CCAGGTACCC AGCACCGTGA GCGTACAGAC CCGCGAACAG
CTGGACCGGC AGAACGTCAA CAGCATCAAG GAACTGGTGC GCTACGAGCC TGGCGTGTCG
GTCGGCGGCG TTGGCCAGCG CAGCGGCCTG AACGGTTACA ACATCCGCGG TATCGACGGC
GAACGCATCC TCACCCAGAT CGACGGTGTG TCGATCCCCG ACAGCTTCTT CTACGGCCCC
TACGCCCAGA CACAGCGCAA CTACGTCGAT CCCGAGATCG TCAAGCGCGT GGAAATCCTG
CGCGGCCCGG CCTCGGTGCT GTACGGCAGT AATGCCATCG GCGGTGCGGT GAGCTACTTC
ACCCTCGACC CGGACGACAT CATCAAGCCC GGCAAGGATG TCGGCGCGCG GCTGAAGACC
GGCTACAGCT CGGCCGACGA CAGCTGGCTG ACCTCCGCCA CCGTGGCCGG CCGCCAGGGC
GATTTCGATG GCTTGCTGCA CGTGAGCCAG CGCAACGGCC ACGAAACCGA ATCCTACGGT
GAAGACGGCG GCACCGGCCT GTCGCGTACC GAAGCCAACC CGGAAGACGT GCGCACCACC
AACGTGCTGG CCAAGCTTGG CTGGAACTAC GCCGACGACG CGCGCCTGGG CTTCACCTAT
GAACGCTACA AGGATGACCG TGACCAGAAC ATCCTAAGCG CCGTGGGCGG TCCGTTCATT
CCAGGCTTTG GTGCCATGAA CTCCTACCGC ATGCGCCAGG GCAACGACAC CGTCACCCGC
GAGCGCTTCG GCATAAACCA CGAGTTCGGC CTCGACAGCC TGGTCGCCGA CCACGTGAAA
TGGAGCCTGA ACTACCAGAT CGCCAAGACC GACCAGCGCA CCGATGAGCT GTATGTCGCG
TCGGGGCGGC AAGTGCTGCG CGACCGCCAG ACCACCTACA AGGACCGCCA ATGGGTGTTC
GATGCCCAGC TGGACAAAGC CTTCAGCATC GGCCAGACCG ATCACCTGCT GACCTACGGC
ACCACCATAA AGCATGAAGA AGTGACCGGC TCACGCAGCG GCTCCGGCAC CTGTGTGGCC
ATTGGCGGTA GCTGCACCGC CATCGGCCAG GACAGCTCGC GCGACGGCCA GGCCCTGGTC
AGCGATTTCC CGGACCCGAC CATCAACACC TACAGCCTGT TCGTGCAGGA TGAAATCCGC
TGGAACAACT GGACCTTCCT GCCAGGTGCC CGCTACGACT ACACGCGCAT GGAGCCCAAG
TTCACCGACG CGTTCCTGCG TGGCATTCAG GGCTCGGGCG CAGCGCCAGG CGCCCTCGAC
GACTCGGACA AGAAGTGGCA CCGCGTGTCG CCCAAGTTCG GCCTGACCTA CGCCTTCAAC
GACAACTACA CCTGGTACGG CCAGTACGCC GAAGGCTTCC GCACGCCGAC AGCCAAGTCG
ATGTACGGCC GCTTCGAGAA CCCGACACTG GGCTACAGCG TGCAGGGCAA CCCCGGGCTT
GAGCCGGAGA AGAGCAAGAG CTACGAGACC GGCCTGCGTG GCAACTTCGA TGCCGGTAAC
TTCAGCGCTG CGGTCTTCTA CAACAAGTAC CGCGACTTCA TCGACGAAGA CGCCGTGCAG
TCGGCCAACC TGGAAACCAC TTTCCAGGCC CACAACATCA AGCACGCCAC CATCAAGGGC
GCCGAGGTCA AGGGCCGCCT CAACCTCGAC CACTTCGGTG CGCCAGAAGG CCTGTACACC
CAGGGTTCGA TCGCTTACGC CAACGGCCGC AACGACGACA ACGGCCAGCC GCTGAACAGC
GTCAACCCAC TGACCGGCGT GTTCGGCCTG GGTTATGAGC AGCCAAACTA CGGTGGCCTG
TTGAGCTGGA CCCTGGTCAA GCGCAAGACC CGCGTCGACG ACACCACCTT CTTTGCCCCC
GACGGCGCAA GCTCGCAGTT CCGCACGCCC GGCTACGGTG TGCTGGACCT GAGCGGCTTC
TACAAGGTGA CCGACGATGT CACGGTCAAT GCCGGGCTAT ACAACCTCAC CGACAAGAAG
TACTGGCAAT GGGATGACGT GCGCGGCTAC GACGGCCAGG GTGAAGCGGG TGTGACCCAG
CCTGCCAACC TCGACCGCCT GACCATGCCA GGGCGCAACT TCGCCATCAA TGTGGTTTGG
GATATCTGA
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| Protein sequence | MSTGPTSPSP LPRRTGQLSL LTLALLASGA CGLPALAAEP AQATSPRMGD YRFSITQQPL
VEAINAFSQV TGWQVGFSAE LADGVASPGV HGSLPPEAAL KQLLQGTGLG YRKISNGNVV
LERQTAGNAI ALQQLTVSAT RSAQDVSQVP STVSVQTREQ LDRQNVNSIK ELVRYEPGVS
VGGVGQRSGL NGYNIRGIDG ERILTQIDGV SIPDSFFYGP YAQTQRNYVD PEIVKRVEIL
RGPASVLYGS NAIGGAVSYF TLDPDDIIKP GKDVGARLKT GYSSADDSWL TSATVAGRQG
DFDGLLHVSQ RNGHETESYG EDGGTGLSRT EANPEDVRTT NVLAKLGWNY ADDARLGFTY
ERYKDDRDQN ILSAVGGPFI PGFGAMNSYR MRQGNDTVTR ERFGINHEFG LDSLVADHVK
WSLNYQIAKT DQRTDELYVA SGRQVLRDRQ TTYKDRQWVF DAQLDKAFSI GQTDHLLTYG
TTIKHEEVTG SRSGSGTCVA IGGSCTAIGQ DSSRDGQALV SDFPDPTINT YSLFVQDEIR
WNNWTFLPGA RYDYTRMEPK FTDAFLRGIQ GSGAAPGALD DSDKKWHRVS PKFGLTYAFN
DNYTWYGQYA EGFRTPTAKS MYGRFENPTL GYSVQGNPGL EPEKSKSYET GLRGNFDAGN
FSAAVFYNKY RDFIDEDAVQ SANLETTFQA HNIKHATIKG AEVKGRLNLD HFGAPEGLYT
QGSIAYANGR NDDNGQPLNS VNPLTGVFGL GYEQPNYGGL LSWTLVKRKT RVDDTTFFAP
DGASSQFRTP GYGVLDLSGF YKVTDDVTVN AGLYNLTDKK YWQWDDVRGY DGQGEAGVTQ
PANLDRLTMP GRNFAINVVW DI
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