| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4209 |
|---|
| Symbol | |
|---|
| ID | 6113178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4641698 |
|---|
| End bp | 4642984 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641624003 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001751058 |
|---|
| Protein GI | 170723370 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGA CTCTCCGCCT CGCTGCCGCG ATCTCCTTCG CCTCCCTGTT CCCGCTCAGT
GCCTTCGCCG CCGACTCCAA AGGCAGTGTC GAAGTGGTTC ACTGGTGGAC ATCCGGTGGT
GAAAAAGCGG CAGTCGATGT GCTCAAGGCC CAGGTCGAGA AGGATGGCTT CACCTGGAAG
GATGGTGCGG TTGCCGGCGG TGGTGGCGCC ACGGCCATGA CCGTGCTCAA GAGTCGCGCC
GTGGCCGGTA ACCCGCCTGG CGTTGCCCAG ATCAAGGGGC CGGACATTCA GGACTGGGCT
GCCACCGGCC TGCTGGACCC GGATGTGCTC AAGGATGTGG CCAAGCAAGA GAAGTGGGAT
TCGTTGCTCG ACAAGAAAGT CGCCGACACC GTCAAGTACG AAGGTGACTA CGTGGCCGTG
CCGGTGAACA TCCACCGCAT CAACTGGCTG TGGATCAACC CCGAAGTGTT CAAAAAGGCT
GGCATCGACA AGGCGCCGAC CACCCTCGAC GAATTCTACG CCGCCGCCGA CAAACTCAAG
GCCGCCGGCT TCATCCCGCT CGCCCACGGC GGCCAGCCAT GGCAGGACAG CACGGTGTTC
GAGAGTGTGG TGCTGTCGGT GATGGGGGCA GACGGTTACA AGAAAGCGCT GGTCGACCTC
GATGAAGCCA CGCTGACCGG GCCGCAGATG GTCAAGTCGC TGACCGAGCT GAAGAAGGTC
GCCACCTACA TGGACCCTGA CGGCAAAGGC CAGGACTGGA ACCTGGAAGC GGCCAAAGTC
ATCAATGGCA AGGCCGGCAT GCAGATCATG GGCGACTGGG CCAAGAGCGA GTGGACCTTG
GCCAAGAAGA CCGCCGGCAA GGACTACCAG TGCGTCGCGT TCCCAGGCAC CGACAAGGCC
TTCCTGTACA ACATCGACTC GCTGGTGGTG TTCAAGCAGA ACGACGAGGG CACGGCCGCT
GGCCAGCAGG ACATCGCCAA AAAGGTGCTT GGCCAGGACT TCCAGAAGGT CTTCAGCATC
AACAAAGGCT CCATTCCCGT GCGTAACGAC ATGCTCGCGG ACATGGGCAC CTATGGCTTC
GACGCTTGCG CCCAGACTTC TGCCAAGGAC TTCATGGCCG ACGCCAAAAC CGGCGGCCTG
CAGCCGAGCA TGGCGCACAA CATGGCCACC ACGCTGGCCG TGCAGGGCGC TTTCTTCGAT
GTGGTCACCA ACTACATCAA CGATCCCAAG GCCGACCCTG CCGATGCAGC GAAAAAGCTG
GCGGCGGCGA TCAGATCGGC CAAGTAA
|
|---|
| Protein sequence | MNSTLRLAAA ISFASLFPLS AFAADSKGSV EVVHWWTSGG EKAAVDVLKA QVEKDGFTWK
DGAVAGGGGA TAMTVLKSRA VAGNPPGVAQ IKGPDIQDWA ATGLLDPDVL KDVAKQEKWD
SLLDKKVADT VKYEGDYVAV PVNIHRINWL WINPEVFKKA GIDKAPTTLD EFYAAADKLK
AAGFIPLAHG GQPWQDSTVF ESVVLSVMGA DGYKKALVDL DEATLTGPQM VKSLTELKKV
ATYMDPDGKG QDWNLEAAKV INGKAGMQIM GDWAKSEWTL AKKTAGKDYQ CVAFPGTDKA
FLYNIDSLVV FKQNDEGTAA GQQDIAKKVL GQDFQKVFSI NKGSIPVRND MLADMGTYGF
DACAQTSAKD FMADAKTGGL QPSMAHNMAT TLAVQGAFFD VVTNYINDPK ADPADAAKKL
AAAIRSAK
|
|---|
| |