Gene PputW619_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4209 
Symbol 
ID6113178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4641698 
End bp4642984 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID641624003 
Productextracellular solute-binding protein 
Protein accessionYP_001751058 
Protein GI170723370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGA CTCTCCGCCT CGCTGCCGCG ATCTCCTTCG CCTCCCTGTT CCCGCTCAGT 
GCCTTCGCCG CCGACTCCAA AGGCAGTGTC GAAGTGGTTC ACTGGTGGAC ATCCGGTGGT
GAAAAAGCGG CAGTCGATGT GCTCAAGGCC CAGGTCGAGA AGGATGGCTT CACCTGGAAG
GATGGTGCGG TTGCCGGCGG TGGTGGCGCC ACGGCCATGA CCGTGCTCAA GAGTCGCGCC
GTGGCCGGTA ACCCGCCTGG CGTTGCCCAG ATCAAGGGGC CGGACATTCA GGACTGGGCT
GCCACCGGCC TGCTGGACCC GGATGTGCTC AAGGATGTGG CCAAGCAAGA GAAGTGGGAT
TCGTTGCTCG ACAAGAAAGT CGCCGACACC GTCAAGTACG AAGGTGACTA CGTGGCCGTG
CCGGTGAACA TCCACCGCAT CAACTGGCTG TGGATCAACC CCGAAGTGTT CAAAAAGGCT
GGCATCGACA AGGCGCCGAC CACCCTCGAC GAATTCTACG CCGCCGCCGA CAAACTCAAG
GCCGCCGGCT TCATCCCGCT CGCCCACGGC GGCCAGCCAT GGCAGGACAG CACGGTGTTC
GAGAGTGTGG TGCTGTCGGT GATGGGGGCA GACGGTTACA AGAAAGCGCT GGTCGACCTC
GATGAAGCCA CGCTGACCGG GCCGCAGATG GTCAAGTCGC TGACCGAGCT GAAGAAGGTC
GCCACCTACA TGGACCCTGA CGGCAAAGGC CAGGACTGGA ACCTGGAAGC GGCCAAAGTC
ATCAATGGCA AGGCCGGCAT GCAGATCATG GGCGACTGGG CCAAGAGCGA GTGGACCTTG
GCCAAGAAGA CCGCCGGCAA GGACTACCAG TGCGTCGCGT TCCCAGGCAC CGACAAGGCC
TTCCTGTACA ACATCGACTC GCTGGTGGTG TTCAAGCAGA ACGACGAGGG CACGGCCGCT
GGCCAGCAGG ACATCGCCAA AAAGGTGCTT GGCCAGGACT TCCAGAAGGT CTTCAGCATC
AACAAAGGCT CCATTCCCGT GCGTAACGAC ATGCTCGCGG ACATGGGCAC CTATGGCTTC
GACGCTTGCG CCCAGACTTC TGCCAAGGAC TTCATGGCCG ACGCCAAAAC CGGCGGCCTG
CAGCCGAGCA TGGCGCACAA CATGGCCACC ACGCTGGCCG TGCAGGGCGC TTTCTTCGAT
GTGGTCACCA ACTACATCAA CGATCCCAAG GCCGACCCTG CCGATGCAGC GAAAAAGCTG
GCGGCGGCGA TCAGATCGGC CAAGTAA
 
Protein sequence
MNSTLRLAAA ISFASLFPLS AFAADSKGSV EVVHWWTSGG EKAAVDVLKA QVEKDGFTWK 
DGAVAGGGGA TAMTVLKSRA VAGNPPGVAQ IKGPDIQDWA ATGLLDPDVL KDVAKQEKWD
SLLDKKVADT VKYEGDYVAV PVNIHRINWL WINPEVFKKA GIDKAPTTLD EFYAAADKLK
AAGFIPLAHG GQPWQDSTVF ESVVLSVMGA DGYKKALVDL DEATLTGPQM VKSLTELKKV
ATYMDPDGKG QDWNLEAAKV INGKAGMQIM GDWAKSEWTL AKKTAGKDYQ CVAFPGTDKA
FLYNIDSLVV FKQNDEGTAA GQQDIAKKVL GQDFQKVFSI NKGSIPVRND MLADMGTYGF
DACAQTSAKD FMADAKTGGL QPSMAHNMAT TLAVQGAFFD VVTNYINDPK ADPADAAKKL
AAAIRSAK