| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4200 |
|---|
| Symbol | |
|---|
| ID | 6113169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4632315 |
|---|
| End bp | 4632989 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641623994 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_001751049 |
|---|
| Protein GI | 170723361 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TTGAACGCCC CCAGCCTCTG CTCTCGATGG CCGAGAAAGC CGCCCGGATC
GATGCGATCT GTGGGGCGGC GCGCATCCTG CCGGTGATCA CCATCGCCCG TGAGGAAGAC
ATCCTGCCGC TGGCCGATGC CCTGGCCGCT GGTGGTATCC GCACCTTGGA AGTAACCCTG
CGCTCGCAGT ATGGCCTGAA GGCTATCCAG GTGCTGCGTG AGCAGCGTCC GGAACTGTGT
GTCGGCGCCG GCACCGTGCT CGATCGCAGC ATGTTTGCAG CGGTTGAAGC CGCTGGCGCG
CAGTTTGTCG TTACCCCGGG GATCACCCAG GACATCCTCG AGGCTGGGGT GGACAGCGAT
ATCCCATTGC TGCCGGGCAT CAGCACGCCT TCGGAAATCA TGATGGGTTA TGCGCTGGGT
TATCGCCGCT TCAAGCTGTT CCCGGCGGAA ATCAGTGGCG GCGTGGCAGC GATCAAGGCC
TTTGGTGGCC CGTTCGGTGA TATTCGATTC TGCCCTACCG GTGGCGTCAA CCCGGCCAAC
GTGCGCAACT ACATGGCGCT GCCTAACGTG ATGTGCGTGG GTGGGACCTG GATGCTCGAC
AGCAGCTGGA TCAAGAACGG TGACTGGGCG CGGATCGAAG CATGCAGCGC CGAGGCGATG
GCTTTGCTGG ACTGA
|
|---|
| Protein sequence | MTTLERPQPL LSMAEKAARI DAICGAARIL PVITIAREED ILPLADALAA GGIRTLEVTL
RSQYGLKAIQ VLREQRPELC VGAGTVLDRS MFAAVEAAGA QFVVTPGITQ DILEAGVDSD
IPLLPGISTP SEIMMGYALG YRRFKLFPAE ISGGVAAIKA FGGPFGDIRF CPTGGVNPAN
VRNYMALPNV MCVGGTWMLD SSWIKNGDWA RIEACSAEAM ALLD
|
|---|
| |