| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4198 |
|---|
| Symbol | |
|---|
| ID | 6113167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4629185 |
|---|
| End bp | 4630012 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641623992 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001751047 |
|---|
| Protein GI | 170723359 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.663221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC TGTTCGCCCC TCTGCTTGCC CTATCCCTGT TGTTGCTGGC CGGCGGTGCC
CAGGCCAGCT ACATCACCCG CACTCTGAAC AAGCCCGTCC CGGGCGGCGT TGCCGTGGTC
GATCTGGGCC CGGCGGCCAC GGCGCCGAGC GCGCGCTTCG ACGGCAAGCC GGTGCTGGTG
GTGAAAGAGC AGGACACCTG GCTGGCCATC GTCGGCATTC CGCTGACGCA CAAGCCCGGC
CCGGCCGTGC TGTCCCAGGG CGGGCGCAGC CTGCCCTTCA GCGTGGGCAA CAAGAAGTAC
CCCGAGCAGC ACATCACCCT GAAAAACAAG CGCCAGGTCA ACCCCGACCC AGCCGACCTC
AAGCGCATCG ACCGTGAACT GGCAGAGCAG ATCAAGGCCT ACCGCAGCTT CAGCCCTAAC
CTGCCAAGCA ACCTGGTCCT CGACAAGCCG GTCAGCGGCC CGCTGTCGAG CAAGTTCGGC
GTACGGCGCT TCTTCAACGG TGAAGAGCGC AACCCGCATG CGGGGCTGGA TTTCGCGGTG
CCTGCGGGCA CGCCGATCAA GACACCGGCC AATGGCAAGG TGATTCTGGT GGGCGATTAT
TTCTTCAACG GCCGCACGGT GTTCGTCGAC CATGGGCAGG GCTTCATCAG TATGTTCTGC
CATATGTCGA AGATTGATGT GAACGTGGGG CAGCAACTGC GTCGCGGCGA TGTGGTGGGC
AGGGTCGGCT CGACCGGGCG GGCGACCGGG CCGCACATGC ACTGGAATGT CAGCCTGAAT
GATGCGCGGG TGGATCCGGC GATCTTCATT GGTGCGTTCC AGCCCTGA
|
|---|
| Protein sequence | MPRLFAPLLA LSLLLLAGGA QASYITRTLN KPVPGGVAVV DLGPAATAPS ARFDGKPVLV
VKEQDTWLAI VGIPLTHKPG PAVLSQGGRS LPFSVGNKKY PEQHITLKNK RQVNPDPADL
KRIDRELAEQ IKAYRSFSPN LPSNLVLDKP VSGPLSSKFG VRRFFNGEER NPHAGLDFAV
PAGTPIKTPA NGKVILVGDY FFNGRTVFVD HGQGFISMFC HMSKIDVNVG QQLRRGDVVG
RVGSTGRATG PHMHWNVSLN DARVDPAIFI GAFQP
|
|---|
| |