| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4190 |
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| Symbol | |
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| ID | 6113159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4619470 |
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| End bp | 4620927 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623984 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001751039 |
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| Protein GI | 170723351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0675173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCC ATACTGCTTT GCGCCAGCGT TGCGCCAAAT GGCTTTTCGC AACCGGTCTC
TTTCTGTTGC TCGGTGCCTG CGTTGAAAAA CCCAGCACCC TCGAGCGCGT GAAGGAGGAC
GGCGTGCTGC GCGTGATCAC CCGCAACAGC CCGGCCACCT ATTTCCAGGA CCGCAATGGT
GAAACCGGCT TCGAGTACGA GCTGGTCAAG CGTTTCGCCG ACGATCTTGG CGTCAAGCTG
GAGATCGAGA CCGCCGACAA CCTCGACGAA CTGTTCGACG ACCTGGGTAA ACCCTCCGGT
CCGGTGCTGG CAGCAGCCGG CCTGGTCAAC AGCGAGCGGC GCAAGACCCA GGCCAGGTTC
TCCCATCCTT ACCTGGAAGT GACCCCTCAG GTCATTTATC GCAACGGCCG CTCGCGCCCA
ACAGACCCCA AGGGCCTGGT CGGCAAGAAA ATCATGGTGC TCAAAGGCAG CAGCCACGCC
GACCAGCTGG CCGAACTGAA AAGGCGGTAT CCGGGCCTGG AATACGAAGA GTCCGACGCG
GTCGAGGTGG TCGACCTGTT GCGCATGGTC GATGAAGGGC AGATCGACCT GACGCTGGTC
GACTCCAACG AACTGGCGAT GAACCAGGTG TACTTCCCCA ACGTGCGGGT GGCTTTCGAC
CTTGGCGAAA CCCGTAACCA ACGCTGGGCG GTCGCCCCGG GCGAAGACAA CAGCCTGCTG
AACGAAGTCA ACGAATTCCT CGACAAATCG CAGAAAAACG GCACGCTCCA GCGTTTGAAA
GACCGCTATT ACGGCCACGT CGACGTGCTC GGTTACGTGG GCGCCTACAC ATTTGCGCAG
CATTTGCAGC AGCGCCTGCC CAAATACGAA AAATACTTCA AGAGCTACGC CAAGGTCGAG
CAGGTGGACT GGCGCCTGTT GGCCGCGATC GGTTATCAGG AATCCTTGTG GCAACCGGAA
GTCACTTCCA AGACCGGCGT ACGCGGCCTG ATGATGCTGA CCCAGCGCAC CGCCCAGGCA
ATGGGCGTGT CCAATCGCCT GGACCCGAGA CAGAGCATCA AAGGTGGTGC CAAATACTTC
ATGCTGGTCA AGCAGCAGCT TGACGACAGC ATCAAGGAGC CAGACCGTAC CTGGTTCGCC
CTGGCGGCCT ACAACGTCGG CAGCGGCCAC CTTGAAGACG CGCGCACGCT GGCCAAACGA
GAAAAGCTCA ACCCGAACAA GTGGCTGGAC GTGAAGAAGA TGCTACCGCG CCTGTCGCAG
AAACAGTGGT ACCGCCAGAC CAAGTACGGT TACGCCCGTG GTGGCGAGCC GGTGCATTTC
GTGGCGAACA TCCGTCGCTA CTACGACATC CTCACCTGGG TGACCCAGCC GCAGCTCGAG
GGCCAGGTGG CCGAGGGCAA CCTGCACGTG CCGGGGGTCA ACAAGGACAA ACCGGCGGAA
CAGTCACCGC CGATGTAG
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| Protein sequence | MFAHTALRQR CAKWLFATGL FLLLGACVEK PSTLERVKED GVLRVITRNS PATYFQDRNG
ETGFEYELVK RFADDLGVKL EIETADNLDE LFDDLGKPSG PVLAAAGLVN SERRKTQARF
SHPYLEVTPQ VIYRNGRSRP TDPKGLVGKK IMVLKGSSHA DQLAELKRRY PGLEYEESDA
VEVVDLLRMV DEGQIDLTLV DSNELAMNQV YFPNVRVAFD LGETRNQRWA VAPGEDNSLL
NEVNEFLDKS QKNGTLQRLK DRYYGHVDVL GYVGAYTFAQ HLQQRLPKYE KYFKSYAKVE
QVDWRLLAAI GYQESLWQPE VTSKTGVRGL MMLTQRTAQA MGVSNRLDPR QSIKGGAKYF
MLVKQQLDDS IKEPDRTWFA LAAYNVGSGH LEDARTLAKR EKLNPNKWLD VKKMLPRLSQ
KQWYRQTKYG YARGGEPVHF VANIRRYYDI LTWVTQPQLE GQVAEGNLHV PGVNKDKPAE
QSPPM
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