| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4182 |
|---|
| Symbol | |
|---|
| ID | 6113151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4608560 |
|---|
| End bp | 4610200 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641623976 |
|---|
| Product | lipoprotein UxpA |
|---|
| Protein accession | YP_001751031 |
|---|
| Protein GI | 170723343 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA GTGTGTACAG GCGCGAAATG ATCAGATGGA TGGGTGTCGG TGCCCTGGCA
CCGTTGCTCG GTGCCTGTTC TGCATTCCCG GGCCAGCGCG GCGGCAATGC CAGCCTGGAC
CTGTTGTACG TCGCCGACAC CCTCGATGCG CGCCAGCCCG GCCAGCCCGT GGTGCCGTCA
ACCCGCCTGG GCCCGGTCAG CCACTTGGGC CGGGCTCCCT GGATGACCGG CGCCAGCGCC
AGCGTGGCGC ACCCTCAACT CGCGCCCTTG CTCGATGCCA GCCAGGCGGC CGGCGTGCAG
CTGGGTGGTT ATGCCGTGCT CGCGGCCCTG TTGGAACAAC TGCGCGCCGA GGTGGGGCCG
GGCAATAGCC TGACTCTCGA AAACGGCCAG GGCTGGAACG GCAGTGGCCT GGCCTATTTG
ACCCAGGGCG AGAGCGGTGT GCAGGGCAGC CAACTGTTGG GCAGCGAAGC CCGTGTGAGC
AGTGATGAAC GCGTGCTTTG GCCACAGCGC AGTGCTGCCC TTTACCACCA GTCTTCAGCG
ATGACGCTTG CTGCGGGTAT TGCCGACGAA CAACGCAAAA CCTTGGGCCT GGAGCCTCTG
CACGTGTTCG AGCGCGGCGG TGCACGCATC GCCGTGGTGG GCGTCACCGA CCCTTACGCC
CAGGACCAGA AAGCCTCTCT CAAACAGTGG TACCAATCGC TGCTGCCGAC CTTCGAGCAG
GCCCGCCGCG AAGCGGACCT GGTGGTGGCG CTGGCGGATG TCGGCACCGG CCCGGGCCTG
TGGCTGGCCG AGCGCGTGGC GCAGATCGAC GTGCTGCTCT GCGCGCGTGG CCAGGACCTG
TGGCCCACAC CTGTGCAGGC AACCCAGGCC AGCGGCCGCC GCATACCGGT GTTGTTTGCC
GGTTGCCGGG GCAGTGGTGC GTTTCGCCTG CGTTGCCAAC AGGTCGCCGG GCAATGGCAG
TTCGATGGGC GCTTCTTTCC GGCATTGGCC CAGCAACTCT CACCCGCAGC GCAGTTGCGC
GCCAACCAGT TGCAGGCCGA GTTGCGCCAG CAGCGCGCAG GCCATGCAGC GTGGCTCGAC
CAGCCGCTGG CGGTTGCGCC ACAGGCGCTG TGGCGTCGCG ACACGCGTGG CGGTAGTTGG
GACCGTTTGC TGCACCAGGC CCTGGCCGAT GACAGCAGCA TGCCGGTGCT GTTGCCGGGC
CTGCGCTATG ACTACCCATT GGCCGCTGGC GAGGCCATCA CGCGCGAGCA CCTGATCAGC
CTCACCGGCG GCTACCCGGC ACCGGTGGTC GAGGCGCCGG CCCGGCAGGT CGAGCAGGTG
CTGGAAAACG CGGCCGAGCA ACTGTTCGGT GACCCCTTGC TGCTGGACAA CAGCCAGGAC
CTGCCACGCT GGCAGGGCCA GGCCTGGCGG GTGAGCTACA GCCCGCAAGG CAAGCGCATC
ACTGGCCTGG ATCCGGTTCA GGGCCTGTGC CGCACCTTTG GTCTGCAATT CGAGCCCCAA
GCCGGTGAGC CGTTGTGGCA GCGGGTCGAG GCCTGGCTCG GGCGACAGCG GCCGGGTTGG
CAACTGGCGG CCTTGCAAGT ACCGGAGGTG CGCTATGTGC AAGGCCACCC AGGCTGGCAC
CCACGGCAGT TGATGTCATG A
|
|---|
| Protein sequence | MASSVYRREM IRWMGVGALA PLLGACSAFP GQRGGNASLD LLYVADTLDA RQPGQPVVPS
TRLGPVSHLG RAPWMTGASA SVAHPQLAPL LDASQAAGVQ LGGYAVLAAL LEQLRAEVGP
GNSLTLENGQ GWNGSGLAYL TQGESGVQGS QLLGSEARVS SDERVLWPQR SAALYHQSSA
MTLAAGIADE QRKTLGLEPL HVFERGGARI AVVGVTDPYA QDQKASLKQW YQSLLPTFEQ
ARREADLVVA LADVGTGPGL WLAERVAQID VLLCARGQDL WPTPVQATQA SGRRIPVLFA
GCRGSGAFRL RCQQVAGQWQ FDGRFFPALA QQLSPAAQLR ANQLQAELRQ QRAGHAAWLD
QPLAVAPQAL WRRDTRGGSW DRLLHQALAD DSSMPVLLPG LRYDYPLAAG EAITREHLIS
LTGGYPAPVV EAPARQVEQV LENAAEQLFG DPLLLDNSQD LPRWQGQAWR VSYSPQGKRI
TGLDPVQGLC RTFGLQFEPQ AGEPLWQRVE AWLGRQRPGW QLAALQVPEV RYVQGHPGWH
PRQLMS
|
|---|
| |